Evidence map›Paper›PMID 40014376›Full record

ArticleeLife2025

Emerging cooperativity between Oct4 and Sox2 governs the pluripotency network in early mouse embryos.

Yanlin Hou, Zhengwen Nie, Qi Jiang, Sergiy Velychko, Sandra Heising, Ivan Bedzhov, Guangming Wu, Kenjiro Adachi, Hans R Scholer

Abstract read
In one paragraph

Article in eLife, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. ALKBH5/IGF2BP1-mediated mCell biology and toxicology · 2026
    Article
  4. Review
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Yanlin HouCell and Developmental Biology Group, Max Planck Institute for Molecular Biomedicine, Münster, Germany.ORCID https://orcid.org/0009-0005-0582-8303
Zhengwen NieGuangzhou National Laboratory, Guangzhou International Bio Island, Guangzhou, China.
Qi JiangGuangzhou National Laboratory, Guangzhou International Bio Island, Guangzhou, China.
Sergiy VelychkoDepartment of Genetics, Harvard Medical School, Boston, United States.ORCID https://orcid.org/0000-0002-6227-3966
Sandra HeisingCell and Developmental Biology Group, Max Planck Institute for Molecular Biomedicine, Münster, Germany.
Ivan BedzhovEmbryonic Self-Organization Research Group, Max Planck Institute for Molecular Biomedicine, Münster, Germany.
Guangming WuGuangzhou National Laboratory, Guangzhou International Bio Island, Guangzhou, China.ORCID https://orcid.org/0000-0003-1923-7609
Kenjiro AdachiCell and Developmental Biology Group, Max Planck Institute for Molecular Biomedicine, Münster, Germany.ORCID https://orcid.org/0009-0003-0161-1508
Hans R ScholerCell and Developmental Biology Group, Max Planck Institute for Molecular Biomedicine, Münster, Germany.ORCID https://orcid.org/0000-0002-7422-8847

Funding

Max Planck Society the White Paper Project "Animal testing in the Max-Planck-Society"
6 · The paper itself

Abstract

During the first lineage segregation, mammalian embryos generate the inner cell mass (ICM) and trophectoderm (TE). ICM gives rise to the epiblast (EPI) that forms all cell types of the body, an ability referred to as pluripotency. The molecular mechanisms that induce pluripotency in embryos remain incompletely elucidated. Using knockout (KO) mouse models in conjunction with low-input ATAC-seq and RNA-seq, we found that Oct4 and Sox2 gradually come into play in the early ICM, coinciding with the initiation of Sox2 expression. Oct4 and Sox2 activate the pluripotency-related genes through the putative OCT-SOX enhancers in the early ICM. Furthermore, we observed a substantial reorganization of chromatin landscape and transcriptome from the morula to the early ICM stages, which was partially driven by Oct4 and Sox2, highlighting their pivotal role in promoting the developmental trajectory toward the ICM. Our study provides new insights into the establishment of the pluripotency network in mouse preimplantation embryos.

Indexed as

Embryo, MammalianEmbryonic Stem CellsGene Expression Regulation, DevelopmentalOctamer Transcription Factor-3SOXB1 Transcription FactorsAnimalsBlastocystBlastocyst Inner Cell MassFemaleMiceMice, KnockoutMorulaRNA-SeqOctamer Transcription Factor-3Pou5f1 protein, mouseSox2 protein, mouseSOXB1 Transcription Factorschromatin accessibilitydevelopmental biologyembryonic developmentinner cell massmouseOct4Sox2transcriptome

Identifiers

PMID40014376
PMCPMC11867617

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.