Evidence map›Paper›PMID 40013867›Full record

ArticleAdvanced science (Weinheim, Baden-Wurttemberg, Germany)2025

Host Plasma Microenvironment in Immunometabolically Impaired HIV Infection Leads to Dysregulated Monocyte Function and Synaptic Transmission Ex Vivo.

Flora Mikaeloff, Marco Gelpi, Alejandra Escós, Tianqi Wang, Soham Gupta, Anna Olofsson, Sara Svensson Akusjärvi, Sabrina Schuster, Prajakta Naval, Vikas Sood and 23 more

Abstract read
In one paragraph

Article in Advanced science (Weinheim, Baden-Wurttemberg, Germany), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Observational
  2. Article
  3. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

33 authors.

Flora MikaeloffThe Systems Virology Lab, Division of Clinical Microbiology, Department of Laboratory Medicine, Karolinska Institutet, Huddinge, 141 52, Sweden.
Marco GelpiCopenhagen University Hospital Rigshospitalet, Copenhagen, 2100, Denmark.
Alejandra EscósThe Systems Virology Lab, Division of Clinical Microbiology, Department of Laboratory Medicine, Karolinska Institutet, Huddinge, 141 52, Sweden.
Tianqi WangNeuroscience and Mental Health Innovation Institute and School of Biosciences, Hadyn Ellis Building, Cardiff University, Cardiff, CF24 4HQ, UK.
Soham GuptaThe Systems Virology Lab, Division of Clinical Microbiology, Department of Laboratory Medicine, Karolinska Institutet, Huddinge, 141 52, Sweden.
Anna OlofssonDivision of Clinical Microbiology, Department of Laboratory Medicine, Karolinska Institutet, Huddinge, 141 52, Sweden.
Sara Svensson AkusjärviThe Systems Virology Lab, Division of Clinical Microbiology, Department of Laboratory Medicine, Karolinska Institutet, Huddinge, 141 52, Sweden.
Sabrina SchusterThe Systems Virology Lab, Division of Clinical Microbiology, Department of Laboratory Medicine, Karolinska Institutet, Huddinge, 141 52, Sweden.
Prajakta NavalDivision of Chemistry I, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Solna, 171 65, Sweden.
Vikas SoodThe Systems Virology Lab, Division of Clinical Microbiology, Department of Laboratory Medicine, Karolinska Institutet, Huddinge, 141 52, Sweden.
Negin NikouyanThe Systems Virology Lab, Division of Clinical Microbiology, Department of Laboratory Medicine, Karolinska Institutet, Huddinge, 141 52, Sweden.
Andreas D KnudsenCopenhagen University Hospital Rigshospitalet, Copenhagen, 2100, Denmark.
Beate VestadResearch Institute of Internal Medicine, Oslo University Hospital Rikshospitalet, Oslo, 0372, Norway.
Julie HøghCopenhagen University Hospital Rigshospitalet, Copenhagen, 2100, Denmark.
Johannes R HovNorwegian PSC Research Center, Oslo University Hospital Rikshospitalet, Oslo, 0372, Norway.
Thomas BenfieldDepartment of Infectious Diseases, Copenhagen University Hospital - Amager and Hvidovre, Hvidovre, 2650, Denmark.
Marius TrøseidResearch Institute of Internal Medicine, Oslo University Hospital Rikshospitalet, Oslo, 0372, Norway.
Vinay PawarThe Systems Virology Lab, Division of Clinical Microbiology, Department of Laboratory Medicine, Karolinska Institutet, Huddinge, 141 52, Sweden.
Marijana RucevicOlink AB, Uppsala, 753 30, Sweden.
Rui BenfeitasThe Systems Virology Lab, Division of Clinical Microbiology, Department of Laboratory Medicine, Karolinska Institutet, Huddinge, 141 52, Sweden.
Ákos VégváriDivision of Chemistry I, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Solna, 171 65, Sweden.
Liam O'MahonyDepartments of Medicine and Microbiology, APC Microbiome Ireland, University College Cork, Cork, T12 K8AF, Ireland.
Rajkumar SavaiLung Microenvironmental Niche in Cancerogenesis, Institute for Lung Health (ILH), Justus Liebig University, 35392, Giessen, Germany.
Niklas K BjörkströmCenter for Infectious Medicine, Department of Medicine Huddinge, Karolinska Institutet, Karolinska University Hospital, Huddinge, 141 52, Sweden.
Magda LourdaCenter for Infectious Medicine, Department of Medicine Huddinge, Karolinska Institutet, Karolinska University Hospital, Huddinge, 141 52, Sweden.
João Pedro de MagalhãesGenomics of Ageing and Rejuvenation Lab, Institute of Inflammation and Ageing, University of Birmingham, Birmingham, B15 2WB, UK.
Siegfried WeissDepartment of Molecular Immunology, Helmholtz Centre for Infection Research, 38124, Braunschweig, Germany.
Adil MardinogluScience for Life Laboratory, KTH - Royal Institute of Technology, Solna, 171 65, Sweden.
Mukesh Kumar VarshneyThe Systems Virology Lab, Division of Clinical Microbiology, Department of Laboratory Medicine, Karolinska Institutet, Huddinge, 141 52, Sweden.
Annika C KarlssonDivision of Clinical Microbiology, Department of Laboratory Medicine, Karolinska Institutet, Huddinge, 141 52, Sweden.
Yasir Ahmed SyedNeuroscience and Mental Health Innovation Institute and School of Biosciences, Hadyn Ellis Building, Cardiff University, Cardiff, CF24 4HQ, UK.
Susanne D NielsenCopenhagen University Hospital Rigshospitalet, Copenhagen, 2100, Denmark.
Ujjwal NeogiThe Systems Virology Lab, Division of Clinical Microbiology, Department of Laboratory Medicine, Karolinska Institutet, Huddinge, 141 52, Sweden.ORCID https://orcid.org/0000-0002-0844-3338

Funding

Karolinska Instititute Consolidator 2-117/2023Swedish Research Council 2017-01330Swedish Research Council 2018-06156Swedish Research Council 2021-01756
6 · The paper itself

Abstract

Risk stratification using multi-omics data deepens understanding of immunometabolism in successfully treated people with HIV (PWH) is inadequately explained. A personalized medicine approach integrating blood cell transcriptomics, plasma proteomics, and metabolomics is employed to identify the mechanisms of immunometabolic complications in prolonged treated PWH from the COCOMO cohort. Among the PWHs, 44% of PWH are at risk of experiencing immunometabolic complications identified using the network-based patient stratification method. Utilizing advanced machine learning techniques and a Bayesian classifier, five plasma protein biomarkers; Tubulin Folding Cofactor B (TBCB), Gamma-Glutamylcyclotransferase (GGCT), Taxilin Alpha (TXLNA), Pyridoxal Phosphate Binding Protein (PLPBP) and Large Tumor Suppressor Kinase 1 (LATS1) are identified as highly differentially abundant between healthy control (HC)-like and immunometabolically at-risk PWHs (all FDR<10

Indexed as

HIV InfectionsMonocytesSynaptic TransmissionAdultBiomarkersFemaleHumansMaleMetabolomicsMiddle AgedBiomarkersHIV/AIDSIntegrative omicspatient stratificationpersonalized metabolic models

Identifiers

PMID40013867
PMCPMC12021100

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.