Evidence map›Paper›PMID 40013793›Full record

ArticlemSystems2025

Association of tumor microbiome with survival in resected early-stage PDAC.

Yixuan Meng, Chan Wang, Mykhaylo Usyk, Soyoung Kwak, Chengwei Peng, Kenneth S Hu, Paul E Oberstein, Michelle Krogsgaard, Huilin Li, Richard B Hayes and 1 more

Abstract read
In one paragraph

Article in mSystems, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Yixuan MengDepartment of Population Health, NYU Grossman School of Medicine, New York, New York, USA.ORCID 0000-0002-4047-3385
Chan WangDepartment of Population Health, NYU Grossman School of Medicine, New York, New York, USA.
Mykhaylo UsykDepartment of Population Health, NYU Grossman School of Medicine, New York, New York, USA.ORCID 0000-0002-0374-3753
Soyoung KwakDepartment of Population Health, NYU Grossman School of Medicine, New York, New York, USA.ORCID 0000-0003-4046-5251
Chengwei PengNorthwestern University Feinberg School of Medicine, Chicago, Illinois, USA.
Kenneth S HuDepartment of Radiation Oncology, NYU Grossman School of Medicine, New York, New York, USA.
Paul E ObersteinNYU Laura and Isaac Perlmutter Cancer Center, New York, New York, USA.ORCID 0000-0001-5918-6004
Michelle KrogsgaardNYU Laura and Isaac Perlmutter Cancer Center, New York, New York, USA.
Huilin LiDepartment of Population Health, NYU Grossman School of Medicine, New York, New York, USA.ORCID 0000-0002-8288-7068
Richard B HayesDepartment of Population Health, NYU Grossman School of Medicine, New York, New York, USA.ORCID 0000-0002-0918-661X
Jiyoung AhnDepartment of Population Health, NYU Grossman School of Medicine, New York, New York, USA.ORCID 0000-0002-2900-2304

Funding

Vaccine FacilityP30CA016087 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ADRIANA HEGUY · 1985 to 2026
$83.1M
The Oral Microbiome and Upper Aerodigestive Squamous Cell CancerR01CA159036 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI AHN, JIYOUNG, HAYES, RICHARD BERNARD · 2011 to 2024
$3.5M
Project 2P20CA252728 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI AHN, JIYOUNG · 2020 to 2022
$3.4M
The Oral Mycobiome and Risk of Pancreatic CancerU01CA250186 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI AHN, JIYOUNG, HAYES, RICHARD BERNARD · 2021 to 2024
$2.1M
Novel Computational Methods for Microbiome Data Analysis in Longitudinal StudyR01LM014085 · NLM · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI Huilin Li · 2023 to 2026
$1.5M
NCI NIH HHS P20 CA252728NCI NIH HHS P30 CA016087NCI NIH HHS R01 CA159036NCI NIH HHS U01 CA250186NLM NIH HHS R01 LM014085
6 · The paper itself

Abstract

The pancreas tumor microbiota may influence tumor microenvironment and influence survival in early-stage pancreatic ductal adenocarcinoma (PDAC); however, current studies are limited and small. We investigated the relationship of tumor microbiota to survival in 201 surgically resected patients with localized PDAC (Stages I-II), from The Cancer Genome Atlas (TCGA) and International Cancer Genome Consortium (ICGC) cohorts. We characterized the tumor microbiome using RNA-sequencing data. We examined the association of the tumor microbiome with overall survival (OS), via meta-analysis with the Cox PH model. A microbial risk score (MRS) was calculated from the OS-associated microbiota. We further explored whether the OS-associated microbiota is related to host tumor immune infiltration. PDAC tumor microbiome α- and β-diversities were not associated with OS; however, 11 bacterial species, including species of

Indexed as

Carcinoma, Pancreatic DuctalMicrobiotaPancreatic NeoplasmsAgedFemaleHumansMaleMiddle AgedNeoplasm StagingTumor Microenvironmentearly stagepancreatic cancersurvivaltumor tissue microbiome

Identifiers

PMID40013793
PMCPMC11915875

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.