Evidence map›Paper›PMID 40013784›Full record

ArticlemSystems2025

Emerging

Firas S Midani, Heather A Danhof, Nathanael Mathew, Colleen K Ardis, Kevin W Garey, Jennifer K Spinler, Robert A Britton

Abstract read
In one paragraph

Article in mSystems, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Phenotypic analysis of variousApplied and environmental microbiology · 2025
    Article
  6. Phenotypic analysis of variousbioRxiv : the preprint server for biology · 2025
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Firas S MidaniAlkek Center for Metagenomics and Microbiome Research, Baylor College of Medicine, Houston, Texas, USA.ORCID 0000-0002-2473-7758
Heather A DanhofAlkek Center for Metagenomics and Microbiome Research, Baylor College of Medicine, Houston, Texas, USA.ORCID 0000-0002-6347-0021
Nathanael MathewAlkek Center for Metagenomics and Microbiome Research, Baylor College of Medicine, Houston, Texas, USA.ORCID 0000-0003-4695-4005
Colleen K ArdisAlkek Center for Metagenomics and Microbiome Research, Baylor College of Medicine, Houston, Texas, USA.ORCID 0000-0003-3866-2897
Kevin W GareyDepartment of Pharmacy Practice and Translational Research, University of Houston, Houston, Texas, USA.ORCID 0000-0003-2063-7503
Jennifer K SpinlerDepartment of Pathology and Immunology, Baylor College of Medicine, Houston, Texas, USA.ORCID 0000-0002-7830-7665
Robert A BrittonAlkek Center for Metagenomics and Microbiome Research, Baylor College of Medicine, Houston, Texas, USA.ORCID 0000-0001-8983-9539

Funding

Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI Michael M Ittmann · 2007 to 2026
$73.9M
Organoid Cultivation CoreU19AI157981 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI BLUTT, SARAH E · 2021 to 2025
$12.4M
Research Training in Pediatrics GastroenterolgyT32DK007664 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI DOUGLAS G BURRIN · 1991 to 2026
$8.4M
Decoding Antibiotic-induced Susceptibility to Clostridium difficile InfectionU01AI124290 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI BRITTON, ROBERT A, GAREY, KEVIN W · 2016 to 2020
$7.9M
Diet driven evolution of epidemic ribotypes of Clostridium difficileR01AI123278 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI BRITTON, ROBERT A · 2018 to 2022
$2.0M
Metabolic adaptation drives pathogenicity of C. difficile epidemic strain RT078F32AI136404 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI DANHOF, HEATHER A. · 2019 to 2021
$191k
HHS | National Institutes of Health (NIH) F32AI136404HHS | National Institutes of Health (NIH) R01AI123278HHS | National Institutes of Health (NIH) T32DK007664HHS | National Institutes of Health (NIH) U01AI124290HHS | National Institutes of Health (NIH) U19AI157981NCI NIH HHS P30 CA125123NIAID NIH HHS F32 AI136404NIAID NIH HHS R01 AI123278NIAID NIH HHS U01 AI124290NIAID NIH HHS U19 AI157981NIDDK NIH HHS T32 DK007664
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

Clostridioides difficileRibotypingCarbonClostridium InfectionsHumansPhenotypePhylogenyCarboncarbon metabolismClostridioides difficilegrowth modelingribotyping

Identifiers

PMID40013784
PMCPMC11915817

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.