Evidence map›Paper›PMID 40012886›Full record

ArticleFrontiers in toxicology2025

TAME 2.0: expanding and improving online data science training for environmental health research.

Alexis Payton, Elise Hickman, Jessie Chappel, Kyle Roell, Lauren E Koval, Lauren A Eaves, Chloe K Chou, Allison Spring, Sarah L Miller, Oyemwenosa N Avenbuan and 10 more

Abstract read
In one paragraph

Article in Frontiers in toxicology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Alexis Payton *Department of Environmental Sciences and Engineering, Gillings School of Global Public Health, The University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.
Elise Hickman *Department of Environmental Sciences and Engineering, Gillings School of Global Public Health, The University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.
Jessie ChappelDepartment of Environmental Sciences and Engineering, Gillings School of Global Public Health, The University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.
Kyle RoellDepartment of Environmental Sciences and Engineering, Gillings School of Global Public Health, The University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.
Lauren E KovalDepartment of Environmental Sciences and Engineering, Gillings School of Global Public Health, The University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.
Lauren A EavesDepartment of Environmental Sciences and Engineering, Gillings School of Global Public Health, The University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.
Chloe K ChouDepartment of Environmental Sciences and Engineering, Gillings School of Global Public Health, The University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.
Allison SpringDepartment of Environmental Sciences and Engineering, Gillings School of Global Public Health, The University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.
Sarah L MillerDepartment of Environmental Sciences and Engineering, Gillings School of Global Public Health, The University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.
Oyemwenosa N AvenbuanDepartment of Environmental Sciences and Engineering, Gillings School of Global Public Health, The University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.
Rebecca BoylesRenaissance Computing Institute, The University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.
Paul KruseCenter for Computational Toxicology and Exposure, US Environmental Protection Agency, Durham, NC, United States.
Cynthia V RiderDivision of Translational Toxicology, National Institute of Environmental Health Sciences, Durham, NC, United States.
Grace PatlewiczCenter for Computational Toxicology and Exposure, US Environmental Protection Agency, Durham, NC, United States.
Caroline RingCenter for Computational Toxicology and Exposure, US Environmental Protection Agency, Durham, NC, United States.
Cavin Ward-CavinessCenter for Public Health and Environmental Assessment, US Environmental Protection Agency, Chapel Hill, NC, United States.
David M ReifDivision of Translational Toxicology, National Institute of Environmental Health Sciences, Durham, NC, United States.
Ilona JaspersDepartment of Environmental Sciences and Engineering, Gillings School of Global Public Health, The University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.
Rebecca C FryDepartment of Environmental Sciences and Engineering, Gillings School of Global Public Health, The University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.
Julia E RagerDepartment of Environmental Sciences and Engineering, Gillings School of Global Public Health, The University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.

Funding

Biostatstics for Research in Environmental HealthT32ES007018 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Stephanie Engel, Rebecca Fry · 1985 to 2026
$31.3M
The UNC Chapel Hill Superfund Research Program (UNC-SRP)P42ES031007 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Julia Rager · 2020 to 2026
$22.2M
TOXICOLOGYT32ES007126 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ILONA JASPERS, Bernard E. Weissman · 1985 to 2026
$13.0M
Wildland Urban Interface Exposure Toxicity in Cells, Animals, and HumansR01ES035878 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Julia Rager · 2024 to 2026
$2.2M
Mechanisms of wildfire smoke toxicity and susceptibility involving extracellular vesicles in humansF32ES036096 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI HICKMAN, ELISE DANIELLE · 2024 to 2024
$74k
NIEHS NIH HHS F32 ES036096NIEHS NIH HHS P42 ES031007NIEHS NIH HHS R01 ES035878NIEHS NIH HHS T32 ES007018NIEHS NIH HHS T32 ES007126
6 · The paper itself

Abstract

Introduction: Data science training has the potential to propel environmental health research efforts into territories that remain untapped and holds immense promise to change our understanding of human health and the environment. Though data science training resources are expanding, they are still limited in terms of public accessibility, user friendliness, breadth of content, tangibility through real-world examples, and applicability to the field of environmental health science. Methods: To fill this gap, we developed an environmental health data science training resource, the inTelligence And Machine lEarning (TAME) Toolkit, version 2.0 (TAME 2.0). Results: TAME 2.0 is a publicly available website that includes training modules organized into seven chapters. Training topics were prioritized based upon ongoing engagement with trainees, professional colleague feedback, and emerging topics in the field of environmental health research (e.g., artificial intelligence and machine learning). TAME 2.0 is a significant expansion upon the original TAME training resource pilot. TAME 2.0 specifically includes training organized into the following chapters: (1) Data management to enable scientific collaborations; (2) Coding in R; (3) Basics of data analysis and visualizations; (4) Converting wet lab data into dry lab analyses; (5) Machine learning; (6) Applications in toxicology and exposure science; and (7) Environmental health database mining. Also new to TAME 2.0 are "Test Your Knowledge" activities at the end of each training module, in which participants are asked additional module-specific questions about the example datasets and apply skills introduced in the module to answer them. TAME 2.0 effectiveness was evaluated via participant surveys during graduate-level workshops and coursework, as well as undergraduate-level summer research training events, and suggested edits were incorporated while overall metrics of effectiveness were quantified. Discussion: Collectively, TAME 2.0 now serves as a valuable resource to address the growing demand of increased data science training in environmental health research. TAME 2.0 is publicly available at: https://uncsrp.github.io/TAME2/.

Indexed as

codingcomputational toxicologydata sciencedata visualizationsexposure sciencehealth researchmachine learningtraining

Identifiers

PMID40012886
PMCPMC11860945

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.