Evidence map›Paper›PMID 40009677›Full record

ArticleScience advances2025

DET1 dynamics underlie cooperative ubiquitination by CRL4

Abigail E Burgess, Tarren A Loughran, Liam S Turk, Hunter G Nyvall, Jessica L Dunlop, Sam A Jamieson, Jack R Curry, John E Burke, Pavel Filipcik, Simon H J Brown and 1 more

Abstract read
In one paragraph

Article in Science advances, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Impairment of DET1 causes neurological defects and lethality in mice and humans.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Abigail E BurgessDepartment of Biochemistry, School of Biomedical Sciences, University of Otago, Dunedin, New Zealand.ORCID 0000-0002-3522-6347
Tarren A LoughranDepartment of Biochemistry, School of Biomedical Sciences, University of Otago, Dunedin, New Zealand.ORCID 0009-0004-6250-0382
Liam S TurkDepartment of Biochemistry, School of Biomedical Sciences, University of Otago, Dunedin, New Zealand.ORCID 0000-0002-9820-652X
Hunter G NyvallDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, BC, Canada.ORCID 0009-0006-0098-0688
Jessica L DunlopDepartment of Biochemistry, School of Biomedical Sciences, University of Otago, Dunedin, New Zealand.
Sam A JamiesonDepartment of Biochemistry, School of Biomedical Sciences, University of Otago, Dunedin, New Zealand.ORCID 0000-0003-0120-4737
Jack R CurryDepartment of Biochemistry, School of Biomedical Sciences, University of Otago, Dunedin, New Zealand.
John E BurkeDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, BC, Canada.ORCID 0000-0001-7904-9859
Pavel FilipcikDepartment of Biochemistry, School of Biomedical Sciences, University of Otago, Dunedin, New Zealand.ORCID 0000-0003-1958-0458
Simon H J BrownSchool of Chemistry and Molecular Bioscience, Molecular Horizons, and Australian Research Council Centre for Cryo-electron Microscopy of Membrane Proteins, University of Wollongong, Wollongong, NSW, Australia.ORCID 0000-0003-3997-4614
Peter D MaceDepartment of Biochemistry, School of Biomedical Sciences, University of Otago, Dunedin, New Zealand.ORCID 0000-0003-2175-9537

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transcription factor ubiquitination is a decisive regulator of growth and development. The DET1-DDB1-DDA1 (DDD) complex associates with the Cullin-4 ubiquitin ligase (CRL4) and a second ubiquitin ligase, COP1, to control ubiquitination of transcription factors involved in neurological, metabolic, and immune cell development. Here, we report the structure of the human DDD complex, revealing a specific segment of DET1 that can recruit ubiquitin-conjugating (E2) enzymes. Structural variability analysis, mass spectrometry, and mutagenesis based on AlphaFold predictions suggest that dynamic closure of DET1, stabilized by DDA1, underlies coordinated recruitment of E2 enzymes and COP1. Biochemical assays suggest that the E2 acts as a recruitment factor to bring COP1 to DET1 for more effective substrate ubiquitination, which parallels a catalytically inactive E2 enzyme (COP10) in plant DDD complexes. This work provides a clear architecture for regulation and cooperative CRL4

Indexed as

DNA-Binding ProteinsNuclear ProteinsUbiquitinationUbiquitin-Protein LigasesHumansModels, MolecularProtein BindingUbiquitin-Conjugating EnzymesCOP1 protein, humanDDB1 protein, humanDNA-Binding ProteinsNuclear ProteinsUbiquitin-Conjugating EnzymesUbiquitin-Protein Ligases

Identifiers

PMID40009677
PMCPMC11864197

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.