Evidence map›Paper›PMID 40009149›Full record

ArticleMolecular diversity2025

Integrating network pharmacology, molecular docking, and bioinformatics to explore the mechanism of sparganii rhizoma in the treatment of laryngeal cancer.

Meiling Zheng, Rui Zhang, Xinxing Yang, Feiyan Wang, Xiaodi Guo, Long Li, Jin Wang, Yajun Shi, Shan Miao, Wei Quan and 2 more

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular diversity, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Pulmonary fibrosis: Emerging targets and novel therapeutics.The Journal of international medical research · 2026
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Meiling Zheng *Department of Pharmacy, Shaanxi University of Chinese Medicine, Xianyang, Shaanxi, People's Republic of China.
Rui Zhang *Department of Otolaryngology-Head and Neck Surgery, Xijing Hospital, The Fourth Military Medical University, Xi'an, Shaanxi, People's Republic of China.
Xinxing Yang *Ultrasound Department of The First Affiliated Hospital of The Fourth Military Medical University, Xi'an, Shaanxi, People's Republic of China.
Feiyan WangDepartment of Pharmacy, Shaanxi University of Chinese Medicine, Xianyang, Shaanxi, People's Republic of China.
Xiaodi GuoThe College of Life Sciences, Northwest University, Xi'an, Shaanxi, People's Republic of China.
Long LiDepartment of Pharmacy, Xijing Hospital, The Fourth Military Medical University, Xi'an, Shaanxi, People's Republic of China.
Jin WangDepartment of Pharmacy, Xijing Hospital, The Fourth Military Medical University, Xi'an, Shaanxi, People's Republic of China.
Yajun ShiDepartment of Pharmacy, Shaanxi University of Chinese Medicine, Xianyang, Shaanxi, People's Republic of China.
Shan MiaoDepartment of Pharmacy, Xijing Hospital, The Fourth Military Medical University, Xi'an, Shaanxi, People's Republic of China.
Wei QuanDepartment of Pharmacy, Affiliated Hospital of Shaanxi University of Chinese Medicine, Xianyang, Shaanxi, China. fmmuquanwei@163.com.
Shanbo MaDepartment of Pharmacy, Xijing Hospital, The Fourth Military Medical University, Xi'an, Shaanxi, People's Republic of China. rqck@163.com.
Xiaopeng ShiDepartment of Pharmacy, Xijing Hospital, The Fourth Military Medical University, Xi'an, Shaanxi, People's Republic of China. shixiaopeng775471@163.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sparganii Rhizoma (SR) has demonstrated promising anticancer effects across various malignancies; however, its mechanisms in laryngeal cancer (LC) remain poorly understood. This study employs network pharmacology and molecular docking to investigate the molecular mechanisms underlying SR's therapeutic effects on LC, providing novel insights for its potential use in treatment. Active compounds and targets of SR were identified through the TCMSP and Pharmmapper databases, while LC-related targets were sourced from GEO, GeneCards, OMIM, and PharmGkb databases. A Venn diagram generated from these datasets highlighted 58 overlapping targets. The STRING database and Cytoscape 3.9.1 software facilitated the construction of a protein-protein interaction network for these targets, and R language analysis revealed 15 core targets. GO and KEGG enrichment analyses, conducted with the ''clusterProfiler'' package, identified relevant biological processes, cellular components, and molecular functions associated with LC treatment. KEGG analysis suggested SR primarily regulates pathways such as TNF, IL-17, and P53. Molecular docking confirmed SR's ability to bind effectively to the 15 core targets. Molecular dynamics simulations further validated stable protein-ligand interactions for MAPK1, GSK3B, and MAPK14. Core target validation across transcriptional, translational, and immune infiltration levels was performed using GEPIA, HPA, cBioPortal, and TIMER databases. In conclusion, network pharmacology, molecular docking, and dynamics simulations provided insights into SR's mechanism in LC treatment, forming a theoretical basis for further investigation of its therapeutic potential.

Indexed as

Computational BiologyDrugs, Chinese HerbalLaryngeal NeoplasmsMolecular Docking SimulationNetwork PharmacologyRhizomeHumansMolecular Dynamics SimulationProtein Interaction MapsDrugs, Chinese HerbalGEO datasetsLaryngeal cancerMolecular dockingMolecular dynamics simulationsNetwork pharmacologySparganii rhizoma

Identifiers

PMID40009149

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.