Evidence map›Paper›PMID 40008750›Full record

ArticleMolecular oncology2025

Transcriptome-wide analysis of circRNA and RBP profiles and their molecular relevance for GBM.

Julia Latowska-Łysiak, Żaneta Zarębska, Marcin P Sajek, Adriana Grabowska, Alessia Buratin, Paweł Głodowicz, Julia O Misiorek, Konrad Kuczyński, Stefania Bortoluzzi, Marek Żywicki and 5 more

Abstract read
In one paragraph

Article in Molecular oncology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
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  3. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Julia Latowska-ŁysiakDepartment of Molecular Neurooncology, Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznań, Poland.
Żaneta ZarębskaDepartment of Molecular Neurooncology, Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznań, Poland.
Marcin P SajekRNA Bioscience Initiative, University of Colorado School of Medicine, Aurora, CO, USA.
Adriana GrabowskaDepartment of Molecular Neurooncology, Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznań, Poland.
Alessia BuratinDepartment of Molecular Medicine, University of Padua, Italy.
Paweł GłodowiczDepartment of Molecular Neurooncology, Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznań, Poland.
Julia O MisiorekDepartment of Molecular Neurooncology, Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznań, Poland.
Konrad KuczyńskiFaculty of Chemistry, Adam Mickiewicz University, Poznań, Poland.ORCID https://orcid.org/0000-0002-7664-1045
Stefania BortoluzziDepartment of Molecular Medicine, University of Padua, Italy.
Marek ŻywickiDepartment of Computational Biology, Institute of Molecular Biology and Biotechnology, Adam Mickiewicz University, Poznań, Poland.
Jan G KosińskiDepartment of Computational Biology, Institute of Molecular Biology and Biotechnology, Adam Mickiewicz University, Poznań, Poland.
Agnieszka Rybak-WolfOrganoid Platform, Berlin Institute for Medical Systems Biology (BIMSB), Max Delbrück Center for Molecular Medicine (MDC), Berlin, Germany.
Rafał PiestrzeniewiczDepartment of Neurosurgery, Józef Struś Hospital, Poznań, Poland.
Anna M BarciszewskaIntraoperative Imaging Unit, Department of Neurosurgery and Neurotraumatology, Poznań University of Medical Sciences, Poznań, Poland.
Katarzyna RolleDepartment of Molecular Neurooncology, Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznań, Poland.ORCID https://orcid.org/0000-0002-4175-2490

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glioblastoma (GBM) is the most aggressive and lethal type of glioma, characterized by aberrant expression of noncoding RNAs including circular RNAs (circRNAs). CircRNAs may impact cellular processes by interacting with other molecules-like RNA-binding proteins (RBPs). The diagnostic value of circRNA and circRNA/RBP complexes is still largely unknown. To explore circRNA and RBP transcript expression in GBM, we performed and further analyzed RNA-seq data from GBM patients' primary and recurrent tumor samples. We identified circRNAs differentially expressed in primary tumors, the circRNA progression markers in recurrent GBM samples, and the expression profile of RBP genes. Furthermore, we demonstrated the clinical potential of circRNAs and RBPs in GBM and proposed them as stratification markers in de novo assembled tumor subtypes. Additionally, we experimentally validated the subcellular localization of select circRNAs and their interactions with FUS. Subsequently, we showed that circARID1A may play a role in promoting GBM cell proliferation. Overall, we described circRNA-RBP interactions that could play a regulatory role in gliomagenesis and GBM progression and provided a list of molecular players in GBM for further extensive studies.

Indexed as

Brain NeoplasmsGene Expression ProfilingGlioblastomaRNA-Binding ProteinsRNA, CircularTranscriptomeBiomarkers, TumorCell Line, TumorCell ProliferationGene Expression Regulation, NeoplasticHumansBiomarkers, TumorRNA-Binding ProteinsRNA, CircularcircRNAGBMRBPRNA‐seq

Identifiers

PMID40008750
PMCPMC12330939

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.