Evidence map›Paper›PMID 40008390›Full record

ArticleCancer informatics2025

Integrated Bioinformatic Analyses Reveal Thioredoxin as a Putative Marker of Cancer Stem Cells and Prognosis in Prostate Cancer.

Shigeru Sugiki, Tetsuhiro Horie, Kenshiro Kunii, Takuya Sakamoto, Yuka Nakamura, Ippei Chikazawa, Nobuyo Morita, Yasuhito Ishigaki, Katsuhito Miyazawa

Abstract read
In one paragraph

Article in Cancer informatics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

9 authors.

Shigeru SugikiDepartment of Urology, Kanazawa Medical University, Kahoku, Ishikawa, Japan.
Tetsuhiro HorieMedical Research Institute, Kanazawa Medical University, Kahoku, Ishikawa, Japan.ORCID https://orcid.org/0000-0002-2095-9425
Kenshiro KuniiDepartment of Urology, Kanazawa Medical University, Kahoku, Ishikawa, Japan.
Takuya SakamotoMedical Research Institute, Kanazawa Medical University, Kahoku, Ishikawa, Japan.
Yuka NakamuraMedical Research Institute, Kanazawa Medical University, Kahoku, Ishikawa, Japan.
Ippei ChikazawaDepartment of Urology, Kanazawa Medical University, Kahoku, Ishikawa, Japan.
Nobuyo MoritaDepartment of Urology, Kanazawa Medical University, Kahoku, Ishikawa, Japan.
Yasuhito IshigakiMedical Research Institute, Kanazawa Medical University, Kahoku, Ishikawa, Japan.
Katsuhito MiyazawaDepartment of Urology, Kanazawa Medical University, Kahoku, Ishikawa, Japan.ORCID https://orcid.org/0000-0002-0331-3753

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objectives: Prostate cancer stem cells (CSCs) play an important role in cancer cell survival, proliferation, metastasis, and recurrence; thus, removing CSCs is important for complete cancer removal. However, the mechanisms underlying CSC functions remain largely unknown, making it difficult to develop new anticancer drugs targeting CSCs. Herein, we aimed to identify novel factors that regulate stemness and predict prognosis. Methods: We reanalyzed 2 single-cell RNA sequencing data of prostate cancer (PCa) tissues using Seurat. We used gene set enrichment analysis (GSEA) to estimate CSCs and identified common upregulated genes in CSCs between these datasets. To investigate whether its expression levels change over CSC differentiation, we performed a trajectory analysis using monocle 3. In addition, GSEA helped us understand how the identified genes regulate stemness. Finally, to assess their clinical significance, we used the Cancer Genome Atlas database to evaluate their impact on prognosis. Results: The expression of thioredoxin ( Conclusions: Despite the limited sample size in our study and the need for further in vitro and in vivo experiments to demonstrate whether TXN functionally regulates prostate CSCs, our findings suggest that TXN may serve as a novel therapeutic target against CSCs. Moreover, TXN expression in CSCs could be a useful marker for predicting the prognosis of PCa patients.

Indexed as

BioinformaticsMYCProstate cancer stem cellSingle-cell RNA sequencingThioredoxin

Identifiers

PMID40008390
PMCPMC11851766

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.