Evidence map›Paper›PMID 40007769›Full record

ArticleFrontiers in plant science2024

Pan-genome analysis and expression verification of the maize ARF gene family.

Quan-Cai Man, Yan-Qun Wang, Shun-Juan Gao, Zhi-Chang Gao, Zheng-Ping Peng, Jiang-Hui Cui

Abstract read
In one paragraph

Article in Frontiers in plant science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Quan-Cai ManCollege of Agriculture, Hebei Agricultural University, Baoding, China.
Yan-Qun WangCollege of Resource and Environmental Sciences, Hebei Agricultural University, Baoding, China.
Shun-Juan GaoCollege of Agriculture, Hebei Agricultural University, Baoding, China.
Zhi-Chang GaoCollege of Agriculture, Hebei Agricultural University, Baoding, China.
Zheng-Ping PengCollege of Resource and Environmental Sciences, Hebei Agricultural University, Baoding, China.
Jiang-Hui CuiCollege of Agriculture, Hebei Agricultural University, Baoding, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Auxin transcription factors regulate auxin responses and play crucial roles in plant growth, development, and responses to abiotic stress. Utilizing the maize pan-genome data, this study identified 35 ARF family members in maize, comprising 21 core genes, 10 near-core genes, and 4 non-essential genes; no private genes were detected. The construction of a phylogenetic tree using Arabidopsis thaliana revealed that the G3 subfamily comprises the highest number of core genes, with a total of 10, and exhibits relative stability throughout the evolution of maize. The calculation of the Ka/Ks ratios for ARF family members across 26 genomes indicated that, aside from

Indexed as

auxin transcription factorsmaize pan-genomeselection pressurestructure variationtranscriptome data analysis

Identifiers

PMID40007769
PMCPMC11850412

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.