Evidence map›Paper›PMID 40007604›Full record

ArticleFrontiers in cellular and infection microbiology2025

Surveillance of SARS-CoV-2 variants in Henan, China from 2023 to 2024.

Yun Song, Bicong Wu, Hongxia Ma, Yafei Li, Su Yan, Jingjing Pan, Haifeng Wang, Ying Ye, Xueyong Huang, Wanshen Guo

Abstract read
In one paragraph

Article in Frontiers in cellular and infection microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Yun SongHenan Province Center for Disease Control and Prevention, Infectious Disease Prevention and Control Institute, Henan Provincial Key Laboratory of Infectious Disease Pathogens, Zhengzhou, Henan, China.
Bicong WuHenan Province Center for Disease Control and Prevention, Infectious Disease Prevention and Control Institute, Henan Provincial Key Laboratory of Infectious Disease Pathogens, Zhengzhou, Henan, China.
Hongxia MaHenan Province Center for Disease Control and Prevention, Infectious Disease Prevention and Control Institute, Henan Provincial Key Laboratory of Infectious Disease Pathogens, Zhengzhou, Henan, China.
Yafei LiHenan Province Center for Disease Control and Prevention, Infectious Disease Prevention and Control Institute, Henan Provincial Key Laboratory of Infectious Disease Pathogens, Zhengzhou, Henan, China.
Su YanHenan Province Center for Disease Control and Prevention, Infectious Disease Prevention and Control Institute, Henan Provincial Key Laboratory of Infectious Disease Pathogens, Zhengzhou, Henan, China.
Jingjing PanHenan Province Center for Disease Control and Prevention, Infectious Disease Prevention and Control Institute, Henan Provincial Key Laboratory of Infectious Disease Pathogens, Zhengzhou, Henan, China.
Haifeng WangHenan Province Center for Disease Control and Prevention, Infectious Disease Prevention and Control Institute, Henan Provincial Key Laboratory of Infectious Disease Pathogens, Zhengzhou, Henan, China.
Ying YeHenan Province Center for Disease Control and Prevention, Infectious Disease Prevention and Control Institute, Henan Provincial Key Laboratory of Infectious Disease Pathogens, Zhengzhou, Henan, China.
Xueyong HuangHenan Province Center for Disease Control and Prevention, Infectious Disease Prevention and Control Institute, Henan Provincial Key Laboratory of Infectious Disease Pathogens, Zhengzhou, Henan, China.
Wanshen GuoHenan Province Center for Disease Control and Prevention, Infectious Disease Prevention and Control Institute, Henan Provincial Key Laboratory of Infectious Disease Pathogens, Zhengzhou, Henan, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objective: In January 2023, China implemented the "Class B Management" policy, marking a new phase in COVID-19 control. As new SARS-CoV-2 variants continue to emerge, some have shown significant immune evasion, posing challenges to epidemic control efforts. To manage the pandemic effectively, Henan Province launched a surveillance program for SARS-CoV-2 variants, systematically analyzing their clinical characteristics and epidemiological patterns. Methods: This study collected genomic sequence data from 5,965 COVID-19 cases between January 1, 2023, and March 17, 2024, using the Henan Province SARS-CoV-2 variant surveillance system. Genome sequence analysis was performed with CLC Genomics Workbench, and genotyping and sequence alignment were carried out using the Nextclade platform. The clinical severity of different variants was assessed in relation to patient sex, age, clinical classification, and vaccination status. Results: Between Week 1 of 2023 and Week 11 of 2024, a total of 5,965 complete SARS-CoV-2 genome sequences were obtained, including 3,004 male (50.36%) and 2,961 female (49.64%) cases. The majority of cases were mild (5,451 cases, 91.38%), followed by moderate (311 cases, 5.21%) and severe or critical cases (203 cases, 3.4%). The predominant variants included BA.5.2, XBB, and BA.2.86. BA.5.2 was dominant until April 2023, after which it was gradually replaced by XBB. From December 2023, BA.2.86 began to increase and became the predominant variant by January 2024. The XBB variant exhibited a significantly lower rate of severe cases, with most infections being mild ( Conclusion: As SARS-CoV-2 variants evolve, the incidence of severe cases has progressively decreased. Both XBB and BA.2.86 variants exhibit lower pathogenicity. This study provides vital scientific evidence on the epidemiological features, clinical manifestations, and control strategies of SARS-CoV-2 variants. It underscores the importance of continuous viral surveillance and genomic sequencing to guide public health decision-making.

Indexed as

COVID-19SARS-CoV-2AdolescentAdultAgedAged, 80 and overChildChild, PreschoolChinaEpidemiological MonitoringFemaleGenome, ViralGenotypeHumansInfantMaleBA.2.86BA.5.2clinical characteristicsSARS-CoV-2XBB

Identifiers

PMID40007604
PMCPMC11850528

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.