Evidence map›Paper›PMID 40006988›Full record

ArticleViruses2025

Prevalence of Aphid-Transmitted Potyviruses in Pumpkin and Winter Squash in Georgia, USA.

Nirmala Acharya, Manish Kumar, Sudeep Bag, David G Riley, Juan C Diaz-Perez, Alvin M Simmons, Timothy Coolong, Theodore McAvoy

Abstract read
In one paragraph

Article in Viruses, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Nirmala AcharyaDepartment of Horticulture, University of Georgia, Tifton, GA 31793, USA.
Manish KumarDepartment of Plant Pathology, University of Georgia, Tifton, GA 31793, USA.ORCID 0000-0001-9133-0803
Sudeep BagDepartment of Plant Pathology, University of Georgia, Tifton, GA 31793, USA.ORCID 0000-0003-3724-7341
David G RileyDepartment of Entomology, University of Georgia, Tifton, GA 31793, USA.ORCID 0000-0002-2059-0701
Juan C Diaz-PerezDepartment of Horticulture, University of Georgia, Tifton, GA 31793, USA.ORCID 0000-0002-4474-6715
Alvin M SimmonsU.S. Vegetable Laboratory, Agricultural Research Service, United States Department of Agriculture, Charleston, SC 29414, USA.ORCID 0000-0003-0750-0975
Timothy CoolongDepartment of Horticulture, University of Georgia, Athens, GA 30602, USA.
Theodore McAvoyDepartment of Horticulture, University of Georgia, Tifton, GA 31793, USA.ORCID 0000-0001-6340-5767

Funding

UDSA-ARS 6080-22000-027-18-S and 6080-22000-030-016-SUDSA-HATCH 1020319
6 · The paper itself

Abstract

Viruses are a major pathogen challenging the sustainable production of cucurbits worldwide. Pumpkin and winter squash showed severe virus-like symptoms during the fall of 2022 and 2023 in Georgia, USA. Symptomatic leaves were collected from the field and processed for small RNA sequencing for virus identification using high-throughput sequencing (HTS). HTS analysis revealed the presence of two aphid-transmitted viruses (ATVs), zucchini yellow mosaic virus (ZYMV) and papaya ringspot virus (PRSV), along with three whitefly-transmitted viruses, cucurbit chlorotic yellows virus, cucurbit yellow stunting disorder virus, and cucurbit leaf crumple virus. The results of our study suggest a significant shift in ATV's abundance in these two crops between 2022 and 2023. According to the qPCR data in the fall of 2022, pumpkins experience an incidence of 56.25% and 31.25% of PRSV and ZYMV, respectively. Similarly, winter squash shows an incidence of 50% and 32.14% of PRSV and ZYMV, respectively. Mixed infection of both viruses was also observed in these two crops. In 2023, we observed a predominance of ZYMV in pumpkin and winter squash (61.25% and 42.50%, respectively). However, PRSV was not detected in pumpkins, and it was detected at a negligible level (0.62%) in winter squash using qPCR. Phylogenetic analysis of ZYMV-encoded coat protein (CP) and helper component-protease (HC-Pro) from Georgia suggests a close relationship with the European isolates. Conversely, PRSV-encoded CP and NIa-VPg show a more diverse evolutionary history. Overall, this research will provide valuable insights into the dynamics of ZYMV and PRSV in pumpkin and winter squash crops within the southeastern United States.

Indexed as

AphidsCucurbitaPlant DiseasesPotyvirusAnimalsGeorgiaHigh-Throughput Nucleotide SequencingPhylogenyPlant LeavesPrevalenceSeasonsaphidscucurbithigh-throughput sequencingpapaya ringspot virusprevalencepumpkinwinter squashzucchini yellow mosaic virus

Identifiers

PMID40006988
PMCPMC11860210

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.