Evidence map›Paper›PMID 40006786›Full record

ArticlePlants (Basel, Switzerland)2025

Transcriptome Analysis Revealed Hub Genes Related to Tipburn Resistance in Chinese Cabbage (

Yaning Bi, Wenjing Zhang, Yuxiang Yuan, Jianqi Feng, Peiyun Wang, Cong Ding, Yanyan Zhao, Lin Li, Henan Su, Baoming Tian and 3 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Plants (Basel, Switzerland), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Yaning BiInstitute of Vegetables, Henan Academy of Agricultural Sciences, Graduate T&R Base of Zhengzhou University, Zhengzhou 450002, China.
Wenjing ZhangInstitute of Vegetables, Henan Academy of Agricultural Sciences, Graduate T&R Base of Zhengzhou University, Zhengzhou 450002, China.
Yuxiang YuanInstitute of Vegetables, Henan Academy of Agricultural Sciences, Graduate T&R Base of Zhengzhou University, Zhengzhou 450002, China.ORCID 0000-0002-9744-5983
Jianqi FengKaifeng Academy of Agriculture and Forestry Sciences, Institute of Chinese Cabbage, Kaifeng 475000, China.
Peiyun WangKaifeng Academy of Agriculture and Forestry Sciences, Institute of Chinese Cabbage, Kaifeng 475000, China.
Cong DingKaifeng Academy of Agriculture and Forestry Sciences, Institute of Chinese Cabbage, Kaifeng 475000, China.
Yanyan ZhaoInstitute of Vegetables, Henan Academy of Agricultural Sciences, Graduate T&R Base of Zhengzhou University, Zhengzhou 450002, China.
Lin LiInstitute of Vegetables, Henan Academy of Agricultural Sciences, Graduate T&R Base of Zhengzhou University, Zhengzhou 450002, China.
Henan SuInstitute of Vegetables, Henan Academy of Agricultural Sciences, Graduate T&R Base of Zhengzhou University, Zhengzhou 450002, China.
Baoming TianInstitute of Vegetables, Henan Academy of Agricultural Sciences, Graduate T&R Base of Zhengzhou University, Zhengzhou 450002, China.
Fang WeiInstitute of Vegetables, Henan Academy of Agricultural Sciences, Graduate T&R Base of Zhengzhou University, Zhengzhou 450002, China.
Xiaochun WeiInstitute of Vegetables, Henan Academy of Agricultural Sciences, Graduate T&R Base of Zhengzhou University, Zhengzhou 450002, China.
Xiaowei ZhangInstitute of Vegetables, Henan Academy of Agricultural Sciences, Graduate T&R Base of Zhengzhou University, Zhengzhou 450002, China.

Funding

Innovation Team of Henan Academy of Agricultural Sciences 2024TD06Joint Funds of the National Natural Science Foundation of China No.U24A20417Superior Discipline Cultivation of Sci-Tech Research and Development Project of Joint Fundation in Henan Province 242301420127Zhongyuan Sci-Tech Innovation Leading Talents 244200510041
6 · The paper itself

Abstract

Tipburn is a physiological disease in Chinese cabbage. In recent years, this disease has become increasingly serious, affecting the quality and economic benefits of Chinese cabbage. However, little is known about the molecular mechanism by which calcium deficiency induces tipburn. Therefore, we performed transcriptome analysis on Y578-2 (tipburn-resistant accession) and Y920-2 (tipburn-susceptible accession) to identify the genes involved in the tipburn defense mechanism in Chinese cabbage. In this study, phenotypic observation showed that Y920-2 began to display symptoms on the 10th day of calcium deficiency treatment. Through weighted gene co-expression network analysis (WGCNA), three gene modules that were highly related to tipburn resistance were identified. Analysis of gene expression regulation in the three modules revealed 13 hub genes related to tipburn resistance, which were involved in the cell wall, photosynthesis, transcription factors, hormones, and the stress response, indicating that these factors play an important role in the tipburn response of Chinese cabbage. These transcriptome data and analysis results provide a basis for the study of the molecular mechanism of calcium deficiency-induced tipburn in Chinese cabbage.

Indexed as

calcium deficiencyChinese cabbageRNA-seqtipburn

Identifiers

PMID40006786
PMCPMC11859387

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.