Evidence map›Paper›PMID 40004543›Full record

ArticleGenes2025

Comprehensive Genomic Analysis of

Javier Vicente, José María Alonso de Robador, Beatriz Pintos, Arancha Gomez-Garay

Abstract read
In one paragraph

Article in Genes, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Javier VicenteGenetics, Physiology and Microbiology Department, Biology Faculty, Complutense University of Madrid, Ciudad Universitaria, S/N, 28040 Madrid, Spain.ORCID 0000-0002-2129-6096
José María Alonso de RobadorGenetics, Physiology and Microbiology Department, Biology Faculty, Complutense University of Madrid, Ciudad Universitaria, S/N, 28040 Madrid, Spain.
Beatriz PintosGenetics, Physiology and Microbiology Department, Biology Faculty, Complutense University of Madrid, Ciudad Universitaria, S/N, 28040 Madrid, Spain.ORCID 0000-0003-4294-079X
Arancha Gomez-GarayGenetics, Physiology and Microbiology Department, Biology Faculty, Complutense University of Madrid, Ciudad Universitaria, S/N, 28040 Madrid, Spain.

Funding

Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA-CSIC), Madrid, Spain RTA2015-0015-C02-02 ProjectUniversidad Complutense de Madrid CT58/21-CT59/21
6 · The paper itself

Abstract

BACKGROUND/

objectivesBiocontrol agents (BCAs) are gaining attention as sustainable alternatives to chemical pesticides. Understanding their molecular mechanisms is crucial for improving plant protection. This study investigates the genomic features of

methodsWhole-genome sequencing of

resultsGenomic analysis revealed key biocontrol-related pathways. CNV analysis indicated a direct correlation between gene amplification and competitive fitness, with seven genes showing gains and five genes showing losses. GO analysis identified categories such as enzymes, transcription factors, ribosomal and proteasomal complexes, transporters, membrane proteins, RNA processing, and stress-response-related proteins. Secretome analysis identified

conclusionsThis study provides insights into the genomic features of

Indexed as

Biological Control AgentsGenome, FungalSaccharomycetalesDNA Copy Number VariationsFungal ProteinsGenomicsPlant DiseasesProteomicsWhole Genome SequencingBiological Control AgentsFungal Proteinsbiocontrol agentgene copy number variations (CNVs)heat shock proteins (HSPs)secretome analysis

Identifiers

PMID40004543
PMCPMC11855519

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.