Evidence map›Paper›PMID 40001554›Full record

ArticleBiomolecules2025

Blood-Based EWAS of Asthma Polygenic Burden in The Netherlands Twin Register.

Austin J Van Asselt, René Pool, Jouke-Jan Hottenga, Jeffrey J Beck, Casey T Finnicum, Brandon N Johnson, Noah Kallsen, Sarah Viet, Patricia Huizenga, Eco de Geus and 3 more

Abstract readTwin Study
In one paragraph

Article in Biomolecules, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Austin J Van AsseltAvera McKennan Hospital & University Health Center, Sioux Falls, SD 57105, USA.
René PoolDepartment of Biological Psychology, Vrije Universiteit, 1081 BT Amsterdam, The Netherlands.ORCID 0000-0001-5579-0933
Jouke-Jan HottengaDepartment of Biological Psychology, Vrije Universiteit, 1081 BT Amsterdam, The Netherlands.ORCID 0000-0002-5668-2368
Jeffrey J BeckAvera McKennan Hospital & University Health Center, Sioux Falls, SD 57105, USA.ORCID 0000-0002-1152-9968
Casey T FinnicumAvera McKennan Hospital & University Health Center, Sioux Falls, SD 57105, USA.
Brandon N JohnsonAvera McKennan Hospital & University Health Center, Sioux Falls, SD 57105, USA.
Noah KallsenAvera McKennan Hospital & University Health Center, Sioux Falls, SD 57105, USA.
Sarah VietAvera McKennan Hospital & University Health Center, Sioux Falls, SD 57105, USA.
Patricia HuizengaAvera McKennan Hospital & University Health Center, Sioux Falls, SD 57105, USA.
Eco de GeusDepartment of Biological Psychology, Vrije Universiteit, 1081 BT Amsterdam, The Netherlands.ORCID 0000-0001-6022-2666
Dorret I BoomsmaDepartment of Biological Psychology, Vrije Universiteit, 1081 BT Amsterdam, The Netherlands.ORCID 0000-0002-7099-7972
Erik A EhliAvera McKennan Hospital & University Health Center, Sioux Falls, SD 57105, USA.ORCID 0000-0002-7865-3015
Jenny van DongenDepartment of Biological Psychology, Vrije Universiteit, 1081 BT Amsterdam, The Netherlands.ORCID 0000-0003-2063-8741

Funding

Integration of Genomics & Transcriptomics in Normal Twins & Major DepressionRC2MH089951 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SULLIVAN, PATRICK F · 2009 to 2010
$6.5M
Genomics of Developmental Trajectories in TwinsRC2MH089995 · NIMH · UNIVERSITY OF VERMONT & ST AGRIC COLLEGE · PI HUDZIAK, JAMES J. · 2009 to 2010
$3.8M
Collaborative Study of Genetics of Dizygotic TwinningR01HD042157 · NICHD · QUEENSLAND INSTITUTE OF MEDICAL RESEARCH · PI MONTGOMERY, GRANT W · 2002 to 2006
$2.0M
Major Depression: Stage 1 Genomewide Association in Population-Based SamplesR01MH081802 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SULLIVAN, PATRICK F · 2007 to 2007
$138k
Amsterdam Public Health Institute Personalized medicine innovation grantBBRMI-NL-financed BIOS Consortium NWO 184.021.007Biobanking and Biomolecular Research Infrastructure BBMRI-NL, NWO 184.033.111EPA EP-C-15-001Genotype/phenotype database for behavior genetic and genetic epidemiological studies ZonMw Middelgroot 911-09-032Large Scale infrastructures X-Omics 184.034.019Netherlands Organization for Scientific Research (NWO): Netherlands Twin Registry Reposito-ry NWO-Groot 480-15-001/674NICHD NIH HHS R01 HD042157NIH HHS NIH R01 HD042157-01A1, MH081802, Grand Opportunity grants 1RC2 MH089951 and 1RC2 MH089995NIMH NIH HHS R01 MH081802NIMH NIH HHS RC2 MH089951NIMH NIH HHS RC2 MH089995
6 · The paper itself

Abstract

Asthma, a chronic respiratory condition characterized by airway inflammation, affects millions of individuals worldwide. Challenges remain in asthma prediction and diagnosis from its complex etiology involving genetic and environmental factors. Here, we investigated the relationship between genome-wide DNA methylation and genetic risk for asthma quantified via polygenic scores in two cohorts from the Netherlands Twin Register; one enriched with asthmatic families measured on the Illumina EPIC array (n = 526) and a general population cohort measured on the Illumina HM450K array (n = 2680). We performed epigenome-wide association studies of asthma polygenic scores in each cohort with results combined through meta-analysis (total samples = 3206). The EWAS meta-analysis identified 63 significantly associated CpGs, (following Bonferroni correction, α = 0.05/358,316). An investigation of previous mQTL associations identified 48 mQTL associations between 24 unique CpGs and 48 SNPs, of which two SNPs have previous associations with asthma. Enrichment analysis using the 63 significant CpGs highlighted previous associations with ancestry, smoking, and air pollution. A dizygotic twin within-pair analysis of the 63 CpGs revealed similar directional effects between the two cohorts in 33 of the 63 CpGs. These findings further characterize the intricate relationship between DNA methylation and genetics relative to asthma.

Indexed as

AsthmaMultifactorial InheritanceAdultCohort StudiesCpG IslandsDNA MethylationFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansMaleMiddle AgedNetherlandsPolymorphism, Single NucleotideRegistriesasthmaDNA methylationEWASpolygenic risk

Identifiers

PMID40001554
PMCPMC11852504

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.