Evidence map›Paper›PMID 40000637›Full record

ArticleScientific data2025

Endoscapes, a critical view of safety and surgical scene segmentation dataset for laparoscopic cholecystectomy.

Pietro Mascagni, Deepak Alapatt, Aditya Murali, Armine Vardazaryan, Alain Garcia, Nariaki Okamoto, Guido Costamagna, Didier Mutter, Jacques Marescaux, Bernard Dallemagne and 1 more

Abstract readDataset
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Sum-of-Checks: structured reasoning for surgical safety with large vision-language models.International journal of computer assisted radiology and surgery · 2026
    Article
  6. Article
  7. Article
  8. The era of autonomous surgical robotics in thoracic surgery: is it coming?International journal of surgery (London, England) · 2026
    Article
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Pietro Mascagni *IHU Strasbourg, Strasbourg, France. pietro.mascagni@ihu-strasbourg.eu.ORCID http://orcid.org/0000-0001-7288-3023
Deepak Alapatt *ICube, University of Strasbourg, CNRS, Strasbourg, France.
Aditya Murali *ICube, University of Strasbourg, CNRS, Strasbourg, France.
Armine VardazaryanIHU Strasbourg, Strasbourg, France.
Alain GarciaFondazione Policlinico Universitario A. Gemelli IRCCS, Rome, Italy.
Nariaki OkamotoIRCAD, Institute for Research against Digestive Cancer, Strasbourg, France.
Guido CostamagnaFondazione Policlinico Universitario A. Gemelli IRCCS, Rome, Italy.
Didier MutterIHU Strasbourg, Strasbourg, France.ORCID http://orcid.org/0000-0002-7559-3328
Jacques MarescauxIRCAD, Institute for Research against Digestive Cancer, Strasbourg, France.
Bernard DallemagneIHU Strasbourg, Strasbourg, France.
Nicolas PadoyIHU Strasbourg, Strasbourg, France.

Funding

Agence Nationale de la Recherche (French National Research Agency) ANR-10-IAHU-02Agence Nationale de la Recherche (French National Research Agency) ANR-20-CHIA-0029-01
6 · The paper itself

Abstract

Minimally invasive image-guided surgery heavily relies on vision. Deep learning models for surgical video analysis can support surgeons in visual tasks such as assessing the critical view of safety (CVS) in laparoscopic cholecystectomy, potentially contributing to surgical safety and efficiency. However, the performance, reliability, and reproducibility of such models are deeply dependent on the availability of data with high-quality annotations. To this end, we release Endoscapes2023, a dataset comprising 201 laparoscopic cholecystectomy videos with regularly spaced frames annotated with segmentation masks of surgical instruments and hepatocystic anatomy, as well as assessments of the criteria defining the CVS by three trained surgeons following a public protocol. Endoscapes2023 enables the development of models for object detection, semantic and instance segmentation, and CVS prediction, contributing to safe laparoscopic cholecystectomy.

Indexed as

Cholecystectomy, LaparoscopicSurgery, Computer-AssistedDeep LearningHumansVideo Recording

Identifiers

PMID40000637
PMCPMC11861586

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.