Evidence map›Paper›PMID 39995807›Full record

ArticleMultibody system dynamics2023

Long-term dynamic simulation of adipogenic differentiation of a human mesenchymal stem cell.

Manoochehr Rabiei, Vatsal Joshi, Kelli Fowlds, Michael Cho, Alan Bowling

Abstract read
In one paragraph

Article in Multibody system dynamics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Manoochehr RabieiDepartment of Mechanical and Aerospace Engineering, University of Texas at Arlington, Arlington, Texas 76019.
Vatsal JoshiDepartment of Mechanical and Aerospace Engineering, University of Texas at Arlington, Arlington, Texas 76019.
Kelli FowldsDepartment of Bioengineering, University of Texas at Arlington, Arlington, Texas 76019.
Michael ChoDepartment of Bioengineering, University of Texas at Arlington, Arlington, Texas 76019.
Alan BowlingDepartment of Mechanical and Aerospace Engineering, University of Texas at Arlington, Arlington, Texas 76019.

Funding

Diversity Research Supplement for Combining Experiments and Computer Simulation to Improve the Stem Cell Differentiation ProcessR15EB030842 · NIBIB · UNIVERSITY OF TEXAS ARLINGTON · PI BOWLING, ALAN PAUL · 2021 to 2022
$796k
NIBIB NIH HHS R15 EB030842
6 · The paper itself

Abstract

Multibody dynamic simulations of the mechanobiology of cellular processes have not been obtained for time histories of orders larger than one second even with the employment of supercomputers. A mechanobiologically representative model of a cellular process includes subcellular structures with small masses and lengths. A key development in this work is the inclusion of a coarse-grained representation of the cytoskeleton, based on the tensegrity model, with masses from femtogram to picogram in size and lengths from nanometers to microns in size. A second key development is the inclusion in the model of bodies that increase in mass over time. The forces acting on these bodies will be orders of magnitude larger than the masses. The correspondingly large accelerations necessitate the use of small time steps to obtain an accurate solution. Adipogenic differentiation, adipogenesis, of a human bone marrow-derived mesenchymal stem cell (hMSC) develops over a time span of two weeks in the experiment. Numerically integrating this multiscale model for such a long time period is computationally infeasible with conventional methods. A novel scaling approach based on the method of multiple scales is used herein to accurately simulate this two weeks of time history on a desktop computer in less than 3.5 hours. This much faster than real time simulation facilitates the study of the time dependent elements of adipogenesis and the mechanobiology of cellular processes in general.

Indexed as

AdipogenesisAdipogenic Differentiation ProcessBiomechanicsMechanobiologyMultibody DynamicsStem Cells

Identifiers

PMID39995807
PMCPMC11848651

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.