Evidence map›Paper›PMID 39994529›Full record

ArticleBMC genomics2025

Identification through a transcriptomic approach of candidate genes involved in the adaptation of the cyst nematode Globodera pallida to the potato resistance factor GpaV

Océane Lechevalier, Kévin Gazengel, Magali Esquibet, Sylvain Fournet, Eric Grenier, Stéphanie Daval, Josselin Montarry

Abstract read
In one paragraph

Article in BMC genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Océane LechevalierIGEPP, INRAE, Institut Agro, Univ Rennes, Le Rheu, France.
Kévin GazengelIGEPP, INRAE, Institut Agro, Univ Rennes, Le Rheu, France.
Magali EsquibetIGEPP, INRAE, Institut Agro, Univ Rennes, Le Rheu, France.
Sylvain FournetIGEPP, INRAE, Institut Agro, Univ Rennes, Le Rheu, France.
Eric GrenierIGEPP, INRAE, Institut Agro, Univ Rennes, Le Rheu, France.
Stéphanie Daval *IGEPP, INRAE, Institut Agro, Univ Rennes, Le Rheu, France.
Josselin Montarry *IGEPP, INRAE, Institut Agro, Univ Rennes, Le Rheu, France. josselin.montarry@inrae.fr.

Funding

French CasDar project GECONEM C2019-2018-07
6 · The paper itself

Abstract

backgroundSince the banning of chemical products used to control plant-parasitic nematode populations, the use of resistant plants has become the most effective management approach against the potato cyst nematode Globodera pallida. However, some populations, from experimental evolution setups and field samplings, are able to overcome these resistances. Herein, a transcriptomics approach was used to disentangle the mechanisms by which G. pallida adapts to the plant resistant factor GpaV

resultsDifferential gene expression analysis between virulent and avirulent lineages originating from experimental evolution experiments identified candidate genes involved in the adaptation to GpaV

conclusionThese results will have a major impact on our understanding of the mechanisms by which nematodes adapt to resistant plants, and will contribute to identify effective and sustainable management strategies.

Indexed as

Adaptation, PhysiologicalGene Expression ProfilingPlant DiseasesSolanum tuberosumTranscriptomeTylenchoideaAnimalsDisease ResistanceAdaptationEffectorsExperimental evolutionGlobodera pallidaRNAseqSelectionVirulence

Identifiers

PMID39994529
PMCPMC11852814

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.