Evidence map›Paper›PMID 39994485›Full record

ArticleThe EMBO journal2025

Modular in vivo assembly of Arabidopsis FCA oligomers into condensates competent for RNA 3' processing.

Geng-Jen Jang, Alex L Payne-Dwyer, Robert Maple, Zhe Wu, Fuquan Liu, Sergio G Lopez, Yanning Wang, Xiaofeng Fang, Mark C Leake, Caroline Dean

Abstract read
In one paragraph

Article in The EMBO journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Review
  5. FLL2 modulatesiScience · 2025
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Geng-Jen JangDepartment of Cell and Developmental Biology, John Innes Centre, Norwich Research Park, Norwich, UK.
Alex L Payne-DwyerSchool of Physics, Engineering and Technology, University of York, York, UK.
Robert MapleDepartment of Cell and Developmental Biology, John Innes Centre, Norwich Research Park, Norwich, UK.ORCID http://orcid.org/0000-0002-9175-5024
Zhe WuDepartment of Cell and Developmental Biology, John Innes Centre, Norwich Research Park, Norwich, UK.
Fuquan LiuDepartment of Cell and Developmental Biology, John Innes Centre, Norwich Research Park, Norwich, UK.ORCID http://orcid.org/0000-0001-8764-6370
Sergio G LopezDepartment of Cell and Developmental Biology, John Innes Centre, Norwich Research Park, Norwich, UK.ORCID http://orcid.org/0000-0003-4637-123X
Yanning WangCenter for Plant Biology, School of Life Sciences, Tsinghua University, Beijing, China.ORCID http://orcid.org/0000-0003-0100-7901
Xiaofeng FangCenter for Plant Biology, School of Life Sciences, Tsinghua University, Beijing, China.ORCID http://orcid.org/0000-0003-1161-9186
Mark C LeakeSchool of Physics, Engineering and Technology, University of York, York, UK.ORCID http://orcid.org/0000-0002-1715-1249
Caroline DeanDepartment of Cell and Developmental Biology, John Innes Centre, Norwich Research Park, Norwich, UK. caroline.dean@jic.ac.uk.ORCID http://orcid.org/0000-0002-6555-3525

Funding

EC | European Research Council (ERC) EPISWITCH,833254Royal Society (The Royal Society) RSRP\R\231006UKRI | Engineering and Physical Sciences Research Council (EPSRC) EP/T00214X/1UKRI | Engineering and Physical Sciences Research Council (EPSRC) EP/T002166/1UKRI | Engineering and Physical Sciences Research Council (EPSRC) EP/W024063/1Wellcome TrustWellcome Trust (WT) 210654/Z/18/Z
6 · The paper itself

Abstract

Our understanding of the functional requirements underpinning biomolecular condensation in vivo is still relatively poor. The Arabidopsis RNA binding protein FLOWERING CONTROL LOCUS A (FCA) is found in liquid-like nuclear condensates that function in transcription termination, promoting proximal polyadenylation at many target genes in the Arabidopsis genome. To further understand the properties of these condensates in vivo, we used single-particle tracking experiments on FCA reporters stably expressed at endogenous levels in plant nuclei. SEC-MALS analyses suggested that FCA forms a core oligomer consistent with a size of four molecules; in vivo particle tracking indicated that this core molecule multimerizes into higher-order particles. The ensuing assemblies coalesce into macromolecular condensates via the coiled-coil protein FLL2, which is genetically required for FCA function. Accordingly, FLL2 predominately co-localizes with FCA in larger-sized condensates. A missense mutation in the FCA RRM domain, also genetically required for FCA function, reduced average size of both FCA particles and condensates, but did not perturb the core oligomer. Our work points to a modular structure for FCA condensates, involving multimerization of core oligomers assembled into functional macromolecular condensates via associated RNA and FLL2 interactions.

Indexed as

ArabidopsisArabidopsis ProteinsMADS Domain ProteinsRNA 3' End ProcessingRNA-Binding ProteinsCell NucleusGene Expression Regulation, PlantProtein MultimerizationArabidopsis ProteinsFlowering time control protein FCA, ArabidopsisMADS Domain ProteinsRNA-Binding ProteinsBiomolecular CondensateCOOLAIRFLCNon-coding RNARNA Processing

Identifiers

PMID39994485
PMCPMC11962161

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.