Evidence map›Paper›PMID 39994298›Full record

ArticleScientific reports2025

Wide-field OCT volumetric segmentation using semi-supervised CNN and transformer integration.

Syna Sreng, Padmini Ramesh, Pham Duc Nam Phuong, Nur Fidyana Binte Abdul Gani, Jacqueline Chua, Monisha Esther Nongpiur, Tin Aung, Rahat Husain, Leopold Schmetterer, Damon Wong

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Syna SrengSingapore Eye Research Institute, Singapore National Eye Centre, Singapore City, Singapore.
Padmini RameshSingapore Eye Research Institute, Singapore National Eye Centre, Singapore City, Singapore.
Pham Duc Nam PhuongSchool of Chemistry, Chemical Engineering and Biotechnology, Nanyang Technological University, Singapore City, Singapore.
Nur Fidyana Binte Abdul GaniSingapore Eye Research Institute, Singapore National Eye Centre, Singapore City, Singapore.
Jacqueline ChuaSingapore Eye Research Institute, Singapore National Eye Centre, Singapore City, Singapore.
Monisha Esther NongpiurSingapore Eye Research Institute, Singapore National Eye Centre, Singapore City, Singapore.
Tin AungSingapore Eye Research Institute, Singapore National Eye Centre, Singapore City, Singapore.
Rahat HusainSingapore Eye Research Institute, Singapore National Eye Centre, Singapore City, Singapore.
Leopold SchmettererSingapore Eye Research Institute, Singapore National Eye Centre, Singapore City, Singapore.
Damon WongSingapore Eye Research Institute, Singapore National Eye Centre, Singapore City, Singapore. damon.wong@duke-nus.edu.sg.

Funding

Agency for Science, Technology and Research A20H4b0141National Medical Research Council OFLCG/004c/2018-00; MOH-000249-00; MOH-000647-00; MOH-001001-00; MOH-001015-00; MOH-000500-00; MOH-000707-00; MOH-001072-06; MOH-001286-00National Research Foundation Singapore NRF2019-THE002- 0006 and NRF-CRP24-2020-0001
6 · The paper itself

Abstract

Wide-field optical coherence tomography (OCT) imaging can enable monitoring of peripheral changes in the retina, beyond the conventional fields of view used in current clinical OCT imaging systems. However, wide-field scans can present significant challenges for retinal layer segmentation. Deep Convolutional Neural Networks (CNNs) have shown strong performance in medical imaging segmentation but typically require large-scale, high-quality, pixel-level annotated datasets to be effectively developed. To address this challenge, we propose an advanced semi-supervised learning framework that combines the detailed capabilities of convolutional networks with the broader perspective of transformers. This method efficiently leverages labelled and unlabelled data to reduce dependence on extensive, manually annotated datasets. We evaluated the model performance on a dataset of 74 volumetric OCT scans, each performed using a prototype swept-source OCT system following a wide-field scan protocol with a 15 × 9 mm field of view, comprising 11,750 labelled and 29,016 unlabelled images. Wide-field retinal layer segmentation using the semi-supervised approach show significant improvements (P-value < 0.001) of up to 11% against a UNet baseline model. Comparisons with a clinical spectral-domain-OCT system revealed significant correlations of up to 0.91 (P-value < 0.001) in retinal layer thickness measurements. These findings highlight the effectiveness of semi-supervised learning with cross-teaching between CNNs and transformers for automated OCT layer segmentation.

Indexed as

Image Processing, Computer-AssistedNeural Networks, ComputerRetinaTomography, Optical CoherenceAlgorithmsDeep LearningHumansCNNCross-teachingOCT layersSemi-supervised learningTransformer

Identifiers

PMID39994298
PMCPMC11850926

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.