Evidence map›Paper›PMID 39994238›Full record

ArticleScientific data2025

Applying the FAIR Principles to computational workflows.

Sean R Wilkinson, Meznah Aloqalaa, Khalid Belhajjame, Michael R Crusoe, Bruno de Paula Kinoshita, Luiz Gadelha, Daniel Garijo, Ove Johan Ragnar Gustafsson, Nick Juty, Sehrish Kanwal and 13 more

Abstract read
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. To Be FAIR: Theory Specification Needs an Update.Perspectives on psychological science : a journal of the Association for Psychological Science · 2026
    Article
  8. Managing workflow executions with WESkit.Bioinformatics (Oxford, England) · 2026
    Article
  9. Ecology and evolution · 2026
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

Sean R WilkinsonOak Ridge Leadership Computing Facility, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA. wilkinsonsr@ornl.gov.ORCID http://orcid.org/0000-0002-1443-7479
Meznah AloqalaaDepartment of Computer Science, University of Manchester, Manchester, UK.ORCID http://orcid.org/0000-0002-1382-3896
Khalid BelhajjameLAMSADE, PSL, Paris Dauphine University, Paris, France.ORCID http://orcid.org/0000-0001-6938-0820
Michael R CrusoeMathematics of Complex Systems division, Visual and Data-Centric Computing department, Bioinformatics in Medicine group, Zuse Institute Berlin (ZIB), Berlin, Germany.ORCID http://orcid.org/0000-0002-2961-9670
Bruno de Paula KinoshitaEarth Sciences, Barcelona Supercomputing Center, Barcelona, Spain.ORCID http://orcid.org/0000-0001-8250-4074
Luiz GadelhaGerman Human Genome-Phenome Archive (GHGA, W620), German Cancer Research Center (DKFZ), Heidelberg, Germany.ORCID http://orcid.org/0000-0002-8122-9522
Daniel GarijoOntology Engineering Group, Universidad Politécnica de Madrid, Madrid, Spain.ORCID http://orcid.org/0000-0003-0454-7145
Ove Johan Ragnar GustafssonAustralian BioCommons, University of Melbourne, Melbourne, Victoria, Australia.ORCID http://orcid.org/0000-0002-2977-5032
Nick JutyDepartment of Computer Science, University of Manchester, Manchester, UK.ORCID http://orcid.org/0000-0002-2036-8350
Sehrish KanwalClinical Pathology, University of Melbourne Centre for Cancer Research (UMCCR), Parkville, Victoria, Australia.ORCID http://orcid.org/0000-0002-5044-4692
Farah Zaib KhanAustralian BioCommons, University of Melbourne, Melbourne, Victoria, Australia.ORCID http://orcid.org/0000-0002-6337-3037
Johannes KösterBioinformatics and computational oncology (Bioinformatische Algorithmen in der Onkologie), Institute for AI in Medicine (IKIM), University Medicine Essen, University of Duisburg-Essen, Essen, Germany.ORCID http://orcid.org/0000-0001-9818-9320
Karsten Peters-von GehlenData Management Department, Deutsches Klimarechenzentrum GmbH, Hamburg, Germany.ORCID http://orcid.org/0000-0003-0158-2957
Line PouchardCenter for Computing Research, Sandia National Laboratories, Albuquerque, New Mexico, USA.ORCID http://orcid.org/0000-0002-2120-6521
Randy K RannowSilverdraft Supercomputing, Boise, Idaho, USA.ORCID http://orcid.org/0009-0005-7406-6170
Stian Soiland-ReyesDepartment of Computer Science, University of Manchester, Manchester, UK.ORCID http://orcid.org/0000-0001-9842-9718
Nicola SoranzoEarlham Institute, Norwich, UK.ORCID http://orcid.org/0000-0003-3627-5340
Shoaib SufiDepartment of Computer Science, University of Manchester, Manchester, UK.ORCID http://orcid.org/0000-0001-6390-2616
Ziheng SunCenter for Spatial Information Science and Systems, Department of Geography and Geoinformation Science, George Mason University, Fairfax, Virginia, USA.ORCID http://orcid.org/0000-0001-9810-0023
Baiba VilneBioinformatics Group, Riga Stradins University, Riga, Latvia.ORCID http://orcid.org/0000-0002-1084-7067
Merridee A WoutersSchool of Clinical Medicine, University of New South Wales, Kensington, New South Wales, Australia.ORCID http://orcid.org/0000-0002-2121-912X
Denis YuenOntario Institute for Cancer Research, Toronto, Ontario, Canada.ORCID http://orcid.org/0000-0002-6130-1021
Carole GobleDepartment of Computer Science, University of Manchester, Manchester, UK.ORCID http://orcid.org/0000-0003-1219-2137

Funding

Agence Nationale de la Recherche (French National Research Agency) ANR-22-PESN0007
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Identifiers

PMID39994238
PMCPMC11850811

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.