Evidence map›Paper›PMID 39992937›Full record

ArticlePloS one2025

Vertical distribution of methanotrophic archaea in an iron-rich groundwater discharge zone.

Katsunori Yanagawa, Misaki Okabeppu, Sakiko Kikuchi, Fumito Shiraishi, Yumiko Nakajima, Akihiro Kano

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Katsunori YanagawaFaculty of Environmental Engineering, The University of Kitakyushu, Kitakyushu, Fukuoka, Japan.ORCID 0000-0003-0431-3322
Misaki OkabeppuFaculty of Environmental Engineering, The University of Kitakyushu, Kitakyushu, Fukuoka, Japan.
Sakiko KikuchiKochi Institute for Core Sample Research, Institute for Extra-cutting-edge Science and Technology Avant-garde Research (X-star), Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Nankoku, Kochi, Japan.
Fumito ShiraishiEarth and Planetary Systems Science Program, Graduate School of Advanced Science and Engineering, Hiroshima University, Higashi-Hiroshima, Hiroshima, Japan.
Yumiko NakajimaCentral Institute of Radioisotope Science and Safety Management, Kyushu University, Fukuoka, Japan.
Akihiro KanoDepartment of Earth and Planetary Science, Graduate School of Science, The University of Tokyo, Bunkyo-ku, Tokyo, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Anaerobic oxidation of methane coupled to iron reduction (Fe-AOM) is a crucial process for methane removal in terrestrial environments. However, the occurrence of Fe-AOM in natural environments is rare, and the mechanisms behind the direct coupling of methane oxidation and iron reduction remain poorly understood. In this study, we investigated the environmental factors influencing the distribution of methanotrophic archaea in an iron-rich zone of a freshwater pond in Hiroshima Prefecture, Japan. High concentration of dissolved ferrous iron supplied by groundwater discharge led to considerable ferrihydrite precipitation. Pore water methane increased with sediment depth, while nitrate and sulfate concentrations were near detection limits throughout the sediment column. The coexistence of ferric iron and methane suggests the ongoing process of Fe-AOM. Tracer-based experiments using 14C showed potential Fe-AOM rates up to 110 pmol mL-1 day-1. Throughout the sediment core, except at the surface, PCR-based molecular ecological analyses of the 16S rRNA gene and functional genes for anaerobic oxidation of methane revealed abundant sequences belonging to the family "Candidatus Methanoperedenaceae". These geochemical and microbiological findings suggest that Fe-AOM plays a key role in biogeochemical cycles of iron and methane, positioning this environment as a modern analogue of early Earth conditions.

Indexed as

ArchaeaGroundwaterIronMethaneGeologic SedimentsJapanOxidation-ReductionPhylogenyRNA, Ribosomal, 16SIronMethaneRNA, Ribosomal, 16S

Identifiers

PMID39992937
PMCPMC11849818

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.