Evidence map›Paper›PMID 39992504›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2025

Monitoring Cellular Energy Balance in Single Cells Using Fluorescent Biosensors for AMPK.

Nicholaus DeCuzzi, Nont Kosaisawe, Michael Pargett, Markhus Cabel, John G Albeck

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Two novel red-FRET ERK bosensors in the 670-720 nm range.Journal of biological engineering · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Nicholaus DeCuzziDepartment of Molecular and Cellular Biology, University of California, Davis, CA, USA.
Nont KosaisaweDepartment of Molecular and Cellular Biology, University of California, Davis, CA, USA.
Michael PargettDepartment of Molecular and Cellular Biology, University of California, Davis, CA, USA.
Markhus CabelDepartment of Molecular and Cellular Biology, University of California, Davis, CA, USA.
John G AlbeckDepartment of Molecular and Cellular Biology, University of California, Davis, CA, USA. jgalbeck@ucdavis.edu.

Funding

Decoding temporal epithelial signaling programs to restore homeostasis in acute lung injuryR01HL151983 · NHLBI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI ALBECK, JOHN G. · 2021 to 2024
$2.4M
Control of gene expression by dynamic metabolic oscillationsR35GM139621 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI ALBECK, JOHN G. · 2021 to 2025
$1.9M
NHLBI NIH HHS R01 HL151983NIGMS NIH HHS R35 GM139621
6 · The paper itself

Abstract

5'-Adenosine monophosphate-activated protein kinase (AMPK) senses cellular metabolic status and reflects the balance between ATP production and ATP usage. This balance varies from cell to cell and changes over time, creating a need for methods that can capture cellular heterogeneity and temporal dynamics. Fluorescent biosensors for AMPK activity offer a unique approach to measure metabolic status nondestructively in single cells in real time. In this chapter, we provide a brief rationale for using live-cell biosensors to measure AMPK activity, survey the current AMPK biosensors, and discuss considerations for using this approach. We provide methodology for introducing AMPK biosensors into a cell line of choice, setting up experiments for live-cell fluorescent microscopy of AMPK activity, and calibrating the biosensors using immunoblot data.

Indexed as

AMP-Activated Protein KinasesBiosensing TechniquesEnergy MetabolismSingle-Cell AnalysisAdenosine TriphosphateAnimalsCell LineHumansMicroscopy, FluorescenceAdenosine TriphosphateAMP-Activated Protein KinasesAMPKARBiosensorsFluorescent protein reportersForster resonance energy transfer (FRET)Live-cell microscopyMetabolic signalingSingle cell

Identifiers

PMID39992504
PMCPMC12176278

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.