Evidence map›Paper›PMID 39988719›Full record

ArticleScientific reports2025

Lysine-specific demethylase 1 (LSD1) suppresses cellular senescence by riboflavin uptake-dependent demethylation activity.

Taiichi Osumi, Taiki Nagano, Tetsushi Iwasaki, Jotaro Nakanishi, Kazuyuki Miyazawa, Shinji Kamada

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Taiichi OsumiDepartment of Biology, Graduate School of Science, Kobe University, 1-1 Rokkodai-cho, Nada-ku, Kobe, 657-8501, Japan.
Taiki NaganoBiosignal Research Center, Kobe University, 1-1 Rokkodai-cho, Nada-ku, Kobe, 657-8501, Japan.
Tetsushi IwasakiDepartment of Biology, Graduate School of Science, Kobe University, 1-1 Rokkodai-cho, Nada-ku, Kobe, 657-8501, Japan.
Jotaro NakanishiMIRAI Technology Institute, Business Core Technology Center, Shiseido Co., LTD, 1-2-11 Takashima, Nishi-ku, Yokohama, 220-0011, Japan.
Kazuyuki MiyazawaMIRAI Technology Institute, Business Core Technology Center, Shiseido Co., LTD, 1-2-11 Takashima, Nishi-ku, Yokohama, 220-0011, Japan.
Shinji KamadaDepartment of Biology, Graduate School of Science, Kobe University, 1-1 Rokkodai-cho, Nada-ku, Kobe, 657-8501, Japan. skamada@kobe-u.ac.jp.

Funding

Hyogo Science and Technology Association #4067Japan Society for the Promotion of Science 17K15595Japan Society for the Promotion of Science 21K05308Japan Society for the Promotion of Science 25640063JST Support for Pioneering Research Initiated by the Next Generation (SPRING) JPMJSP2148
6 · The paper itself

Abstract

Cellular senescence is defined as a permanent proliferation arrest caused by various stresses, including DNA damage. We have recently identified the riboflavin transporter SLC52A1, whose expression is increased in response to senescence-inducing stimuli. Interestingly, increased expression of SLC52A1 suppresses cellular senescence through the uptake of riboflavin and an increase in intracellular flavin adenine dinucleotide (FAD), an enzyme cofactor synthesized from riboflavin. However, how FAD suppresses cellular senescence has not been fully elucidated. Therefore, in this study, we focused on lysine-specific demethylase 1 (LSD1), which uses FAD as a cofactor. First, we found that LSD1 inhibition promoted DNA damage-induced cellular senescence, whereas ectopic expression of LSD1 suppressed cellular senescence, suggesting that LSD1 suppresses senescence. In addition, the demethylation activity of LSD1 against histone H3 and p53 was increased by senescence-inducing stress in a riboflavin uptake-dependent manner. Furthermore, it was revealed that the LSD1 demethylation activity was required for suppression of pro-senescence genes Sirtuin-4 and p21 whose expression is modified by methylation status of histone H3 and possibly p53, respectively. Collectively, these results suggest that the FAD increase by senescence-inducing stress leads to LSD1-mediated demethylation of histone H3 and p53, which results in the suppression of pro-senescence genes to inhibit senescence induction.

Indexed as

Cellular SenescenceHistone DemethylasesRiboflavinCyclin-Dependent Kinase Inhibitor p21DemethylationDNA DamageFlavin-Adenine DinucleotideHistonesHumansTumor Suppressor Protein p53Cyclin-Dependent Kinase Inhibitor p21Flavin-Adenine DinucleotideHistone DemethylasesHistonesKDM1A protein, humanRiboflavinTumor Suppressor Protein p53Cellular senescenceDemethylationDNA damageFlavin adenine dinucleotide (FAD)LSD1Riboflavin

Identifiers

PMID39988719
PMCPMC11847913

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.