Evidence map›Paper›PMID 39987558›Full record

ArticleThe ISME journal2025

Carbon dioxide enhances Akkermansia muciniphila fitness and anti-obesity efficacy in high-fat diet mice.

Xiangfeng Wang, Qianqian Yang, Changping Shi, Yuyang Wang, Dingming Guo, Xuchun Wan, Pengyuan Dong, Qianyao Zhang, Yueyan Hu, Ruilin Zhang and 3 more

Abstract read
In one paragraph

Article in The ISME journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Xiangfeng WangKey Laboratory of Molecular Biophysics of the Ministry of Education, Hubei Key Laboratory of Bioinformatics and Molecular Imaging, Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, Luoyu Road 1037, Hongshan District, Wuhan, Hubei 430074, China.
Qianqian YangKey Laboratory of Molecular Biophysics of the Ministry of Education, Hubei Key Laboratory of Bioinformatics and Molecular Imaging, Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, Luoyu Road 1037, Hongshan District, Wuhan, Hubei 430074, China.
Changping ShiKey Laboratory of Molecular Biophysics of the Ministry of Education, Hubei Key Laboratory of Bioinformatics and Molecular Imaging, Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, Luoyu Road 1037, Hongshan District, Wuhan, Hubei 430074, China.
Yuyang WangKey Laboratory of Molecular Biophysics of the Ministry of Education, Hubei Key Laboratory of Bioinformatics and Molecular Imaging, Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, Luoyu Road 1037, Hongshan District, Wuhan, Hubei 430074, China.
Dingming GuoKey Laboratory of Molecular Biophysics of the Ministry of Education, Hubei Key Laboratory of Bioinformatics and Molecular Imaging, Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, Luoyu Road 1037, Hongshan District, Wuhan, Hubei 430074, China.
Xuchun WanKey Laboratory of Molecular Biophysics of the Ministry of Education, Hubei Key Laboratory of Bioinformatics and Molecular Imaging, Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, Luoyu Road 1037, Hongshan District, Wuhan, Hubei 430074, China.
Pengyuan DongXi'an Jiaotong-Liverpool University, 111 Ren'ai Road, Suzhou Industrial Park, Suzhou, Jiangsu 215123, China.
Qianyao ZhangNHC Key Laboratory of Drug Addiction Medicine, School of Forensic Medicine, 1168 West Chunrong Road, Yuhua Avenue, Chenggong District, Kunming Medical University, Kunming 650500, China.
Yueyan HuDivision of geriatric Gastroenterology, The First Affiliated Hospital of Kunming Medical University, Xichang Road No. 153, Wuhua District, Kunming, Yunnan 650032, China.
Ruilin ZhangNHC Key Laboratory of Drug Addiction Medicine, School of Forensic Medicine, 1168 West Chunrong Road, Yuhua Avenue, Chenggong District, Kunming Medical University, Kunming 650500, China.
Hongju YangDivision of geriatric Gastroenterology, The First Affiliated Hospital of Kunming Medical University, Xichang Road No. 153, Wuhua District, Kunming, Yunnan 650032, China.
Weihua ChenKey Laboratory of Molecular Biophysics of the Ministry of Education, Hubei Key Laboratory of Bioinformatics and Molecular Imaging, Center for Artificial Intelligence Biology, Department of Bioinformatics and Systems Biology, College of Life Science and Technology, Huazhong University of Science and Technology, Luoyu Road 1037, Hongshan District, Wuhan, Hubei 430074, China.
Zhi LiuKey Laboratory of Molecular Biophysics of the Ministry of Education, Hubei Key Laboratory of Bioinformatics and Molecular Imaging, Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, Luoyu Road 1037, Hongshan District, Wuhan, Hubei 430074, China.

Funding

Famous Medical Specialist of "High-level Talent Training Support Program" in Yunnan Province YNWR-MY-2019-036Innovative Team of Yunnan Province 202305AS350019National Key Research and Development Program of China 2024YFA0918500National Natural Science Foundation of China 31770132Natural Science Foundation of Yunnan Province 202303 AC100021Project of Yunnan Applied Basic Research Project Kunming Medical University Union Foundation 202201AY070001-042Yunnan Provincial Key Research and Development Plan 202403 AC100020
6 · The paper itself

Abstract

Numerous studies and clinical applications have underscored the therapeutic potential of the indigenous gut bacterium Akkermansia muciniphila in various diseases. However, our understanding of how Akkermansia muciniphila senses and responds to host gastrointestinal signals remains limited. Here, we demonstrate that A. muciniphila exhibits rapid growth, facilitated by its self-produced carbon dioxide (CO₂), with key enzymes such as glutamate decarboxylase, carbonic anhydrase, and pyruvate ferredoxin oxidoreductase playing pivotal roles. Additionally, we design a novel delivery system, comprising calcium carbonate, inulin, A. muciniphila, and sodium alginate, which enhances A. muciniphila growth and facilitates the expression of part probiotic genes in mice intestinal milieu. Notably, the administration of this delivery system induces weight loss in mice fed high-fat diets. Furthermore, we elucidate the significant impact of CO₂ on the composition and functional genes of the human gut microbiota, with genes encoding carbonic anhydrase and amino acid metabolism enzymes exhibiting heightened responsiveness. These findings reveal a novel mechanism by which gut commensal bacteria sense and respond to gaseous molecules, thereby promoting growth. Moreover, they suggest the potential for designing rational therapeutic strategies utilizing live bacterial delivery systems to enhance probiotic growth and ameliorate gut microbiota-related diseases.

Indexed as

AkkermansiaCarbon DioxideObesityVerrucomicrobiaAlginatesAnimalsCalcium CarbonateCarbonic AnhydrasesDiet, High-FatGastrointestinal MicrobiomeHumansInulinMaleMiceMice, Inbred C57BLProbioticsAlginatesCalcium CarbonateCarbon DioxideCarbonic AnhydrasesInulinA. muciniphilabacterial growthcarbon dioxidelive bacterial delivery systemobesity

Identifiers

PMID39987558
PMCPMC11931619

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.