Evidence map›Paper›PMID 39986350›Full record

ArticleThe American journal of pathology2025

Interferon-γ/Janus Kinase 1/STAT1 Signaling Represses Forkhead Box A1 and Drives a Basal Transcriptional State in Muscle-Invasive Bladder Cancer.

Shamara S Lawrence, Hironobu Yamashita, Lauren Shuman, Jay D Raman, Monika Joshi, Gregory S Yochum, Xue-Ru Wu, Hikmat A Al-Ahmadie, Joshua I Warrick, Vonn Walter and 1 more

Abstract read
In one paragraph

Article in The American journal of pathology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Shamara S LawrenceDepartment of Pathology and Laboratory Medicine, Pennsylvania State University College of Medicine, Hershey, Pennsylvania.
Hironobu YamashitaDepartment of Pathology and Laboratory Medicine, Pennsylvania State University College of Medicine, Hershey, Pennsylvania.
Lauren ShumanDepartment of Pathology and Laboratory Medicine, Pennsylvania State University College of Medicine, Hershey, Pennsylvania; Department of Urology, Pennsylvania State University College of Medicine, Hershey, Pennsylvania.
Jay D RamanDepartment of Urology, Pennsylvania State University College of Medicine, Hershey, Pennsylvania.
Monika JoshiDivision of Hematology-Oncology, Department of Medicine, Penn State Cancer Institute, Hershey, Pennsylvania.
Gregory S YochumDepartment of Surgery, Pennsylvania State University College of Medicine, Hershey, Pennsylvania; Department of Molecular and Precision Medicine, Pennsylvania State University College of Medicine, Hershey, Pennsylvania.
Xue-Ru WuDepartments of Urology and Pathology, New York University Grossman School of Medicine, New York, New York; Veterans Affairs New York Harbor Healthcare System, New York, New York.
Hikmat A Al-AhmadieDepartment of Pathology, Memorial Sloan Kettering Cancer Center, New York, New York.
Joshua I WarrickDepartment of Pathology and Laboratory Medicine, Pennsylvania State University College of Medicine, Hershey, Pennsylvania; Department of Urology, Pennsylvania State University College of Medicine, Hershey, Pennsylvania.
Vonn WalterDepartment of Molecular and Precision Medicine, Pennsylvania State University College of Medicine, Hershey, Pennsylvania; Department of Public Health Sciences, Pennsylvania State University College of Medicine, Hershey, Pennsylvania. Electronic address: vwalter1@pennstatehealth.psu.edu.
David J DeGraffDepartment of Pathology and Laboratory Medicine, Pennsylvania State University College of Medicine, Hershey, Pennsylvania; Department of Urology, Pennsylvania State University College of Medicine, Hershey, Pennsylvania. Electronic address: degraff100@gmail.com.

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI SELWYN M VICKERS · 1985 to 2026
$347.4M
Reagent/Service CoreP01CA165980 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI WU, XUE-RU · 2013 to 2023
$13.5M
BLRD VA I01 BX002049BLRD VA I01 BX005602BLRD VA IK6 BX004479NCI NIH HHS P01 CA165980NCI NIH HHS P30 CA008748
6 · The paper itself

Abstract

During progression, luminal muscle-invasive bladder cancer (MIBC) can transition to the aggressive basal-squamous (Ba/Sq) subtype. Reduced expression of forkhead box A1 (FOXA1) in the urothelium is a hallmark and driver of the Ba/Sq transcriptional state and squamous differentiation. Ba/Sq tumors are highly inflamed; however, the specific inflammatory pathways contributing to the Ba/Sq state are unknown. In this study, transcriptomic analyses of The Cancer Genome Atlas MIBC cohort were performed to determine whether immune response gene signatures were associated with MIBC molecular states. Results showed that Ba/Sq MIBCs were enriched for the interferon-γ (IFN-γ)-dominant signature. Ba/Sq MIBCs exhibited increased IFN-γ/Janus kinase (JAK)/STAT pathway activity, corresponding to reduced FOXA1 regulon activity. Immunohistochemistry of MIBC specimens demonstrated that JAK1 expression was significantly increased in tumor areas with squamous differentiation. IFN-γ treatment of luminal MIBC cell lines significantly decreased the expression of luminal transcriptional drivers, including FOXA1, and increased the expression of Ba/Sq markers in a STAT1-dependent manner. RNA-sequencing analyses identified IFN-γ as a driver of the Ba/Sq state. The ability of IFN-γ to repress FOXA1 in luminal cells was abrogated by ruxolitinib inhibition of JAK1/2 activity. Additionally, pharmacologic inhibition or genetic ablation of JAK1 restored FOXA1 expression in Ba/Sq MIBC cells. These findings are the first to identify IFN-γ as an epithelial cell-extrinsic mechanism to repress FOXA1 and drive the Ba/Sq state in MIBC.

Indexed as

Hepatocyte Nuclear Factor 3-alphaInterferon-gammaJanus Kinase 1STAT1 Transcription FactorUrinary Bladder NeoplasmsCell Line, TumorFemaleGene Expression Regulation, NeoplasticHumansNeoplasm InvasivenessSignal TransductionFOXA1 protein, humanHepatocyte Nuclear Factor 3-alphaIFNG protein, humanInterferon-gammaJAK1 protein, humanJanus Kinase 1STAT1 protein, humanSTAT1 Transcription Factor

Identifiers

PMID39986350
PMCPMC12163414

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.