Evidence map›Paper›PMID 39985441›Full record

ReviewGenomics, proteomics & bioinformatics2025

Mass Spectrometry-based Solutions for Single-cell Proteomics.

Siqi Li, Shuwei Li, Siqi Liu, Yan Ren

Abstract readReview
In one paragraph

Review in Genomics, proteomics & bioinformatics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Siqi LiHIM-BGI Omics Center, Hangzhou Institute of Medicine (HIM), Chinese Academy of Sciences, Hangzhou 310022, China.ORCID 0000-0003-4026-963X
Shuwei LiNanjing Apollomics Biotech Inc., Nanjing 210033, China.ORCID 0000-0001-7072-0052
Siqi LiuHIM-BGI Omics Center, Hangzhou Institute of Medicine (HIM), Chinese Academy of Sciences, Hangzhou 310022, China.ORCID 0000-0001-9744-3681
Yan RenHIM-BGI Omics Center, Hangzhou Institute of Medicine (HIM), Chinese Academy of Sciences, Hangzhou 310022, China.ORCID 0000-0002-4007-8625

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mass spectrometry-based single-cell proteomics (MS-SCP) is attracting tremendous attention because it is now technically feasible to quantify thousands of proteins in minute samples. Since protein amplification is still not possible, technological improvements in MS-SCP focus on minimizing sample loss while increasing throughput, resolution, and sensitivity, as well as achieving measurement depth, accuracy, and stability comparable to bulk samples. Major advances in MS-SCP have facilitated its application in biological and even medical research. Here, we review the key advancements in MS-SCP technology and discuss the strategies of the typical proteomics workflow to improve MS-SCP analysis from single-cell isolation, sample preparation, and liquid chromatography separation to MS data acquisition and analysis. The review will provide an overall understanding of the development and applications of MS-SCP and inspire more novel ideas regarding the innovation of MS-SCP technology.

Indexed as

Mass SpectrometryProteomicsSingle-Cell AnalysisAnimalsChromatography, LiquidHumansProteinsProteinsData acquisition and analysisLiquid chromatography separationMass spectrometry-based single-cell proteomicsSample preparationSingle-cell isolation

Identifiers

PMID39985441
PMCPMC12221870

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.