Evidence map›Paper›PMID 39984041›Full record

ArticleJournal of global antimicrobial resistance2025

Phenotypic and in silico characterization of carbapenem-resistant Serratia marcescens clinical strains.

Anelise Stella Ballaben, Otávio G G de Almeida, Joseane Cristina Ferreira, Doroti de Oliveira Garcia, Yohei Doi, Robert K Ernst, Marcia R von Zeska Kress, Ana Lúcia da Costa Darini

Abstract read
In one paragraph

Article in Journal of global antimicrobial resistance, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. From Environmental Organism to Nosocomial Threat:Antibiotics (Basel, Switzerland) · 2026
    Review
  2. Article
  3. Antibiotics (Basel, Switzerland) · 2025
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Anelise Stella BallabenDepartment of Agricultural and Environmental Biotechnology, Sao Paulo State University (UNESP), Faculty of Agricultural and Veterinary Sciences, Jaboticabal, Sao Paulo, Brazil; School of Pharmaceutical Sciences of Ribeirao Preto, University of Sao Paulo, Ribeirao Preto, Sao Paulo, Brazil. Electronic address: aneliseballaben@alumini.usp.br.
Otávio G G de AlmeidaSchool of Pharmaceutical Sciences of Ribeirao Preto, University of Sao Paulo, Ribeirao Preto, Sao Paulo, Brazil.
Joseane Cristina FerreiraSchool of Pharmaceutical Sciences of Ribeirao Preto, University of Sao Paulo, Ribeirao Preto, Sao Paulo, Brazil.
Doroti de Oliveira GarciaCenter of Regional Laboratory, Adolfo Lutz Institute, Marilia, Sao Paulo, Brazil.
Yohei DoiDivision of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA; Center for Innovative Antimicrobial Therapy, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.
Robert K ErnstDepartment of Microbial Pathogenesis, School of Dentistry, University of Maryland Baltimore, Baltimore, MD, USA.
Marcia R von Zeska KressSchool of Pharmaceutical Sciences of Ribeirao Preto, University of Sao Paulo, Ribeirao Preto, Sao Paulo, Brazil.
Ana Lúcia da Costa DariniSchool of Pharmaceutical Sciences of Ribeirao Preto, University of Sao Paulo, Ribeirao Preto, Sao Paulo, Brazil.

Funding

Colistin-resistant Acinetobacter baumanniiR01AI104895 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI DOI, YOHEI, ERNST, ROBERT K · 2014 to 2024
$4.2M
MS Diagnostic Bacterial Identification LibraryR01AI147314 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI ERNST, ROBERT K, GOODLETT, DAVID ROBINSON · 2020 to 2024
$2.3M
NIAID NIH HHS R01 AI104895NIAID NIH HHS R01 AI147314
6 · The paper itself

Abstract

backgroundSerratia marcescens, an opportunistic nosocomial Gram-negative bacterium pathogen, has emerged as an important cause of healthcare-associated infections owing to its acquisition of antimicrobial resistance genes (ARGs) and virulence factor determinants.

methodsFour carbapenem-resistant S. marcescens strains were recovered from patients admitted to different hospitals in 2017 and 2018. We assessed the antimicrobial resistance and virulence context, as well as the genetic similarities of four Brazilian S. marcescens strains, and compared the genomes of these S. marcescens isolates with whole genome data of 428 S. marcescens strains available in the NCBI Reference Sequence. Antimicrobial susceptibility testing was performed by disk diffusion and broth microdilution methods according to CLSI recommendations. Whole genome sequencing was performed using Illumina NextSeq 250-bp paired-end sequencing for two isolates, Sm424 and Sm613, which presented representative phenotypes.

resultsThe pathogenicity of both sequenced strains was predicted using the Pathogen Finder tool. Both isolates carried efflux system genes (RND, SMR, MFS, ABC-family) and resistance genes (bla

conclusionS. marcescens has shown increased adaptive, resistance, and pathogenic potential, being responsible for different nosocomial infections.

Indexed as

Anti-Bacterial AgentsCarbapenemsSerratia InfectionsSerratia marcescensBrazilComputer SimulationCross InfectionGenome, BacterialHumansMicrobial Sensitivity TestsPhenotypeVirulenceVirulence FactorsWhole Genome SequencingAnti-Bacterial AgentsCarbapenemsVirulence FactorsAntimicrobial resistanceMDRMicrobial genomicsPhylogeny

Identifiers

PMID39984041
PMCPMC12264472

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.