Evidence map›Paper›PMID 39983708›Full record

ArticleEmerging infectious diseases2025

Respiratory Shedding of Infectious SARS-CoV-2 Omicron XBB.1.41.1 Lineage among Captive White-Tailed Deer, Texas, USA.

Francisco C Ferreira, Tahmina Pervin, Wendy W Tang, Joseph A Hediger, Logan F Thomas, Walter E Cook, Michael J Cherry, Benjamin W Neuman, Gabriel L Hamer, Sarah A Hamer

Abstract read
In one paragraph

Article in Emerging infectious diseases, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Francisco C Ferreira
Tahmina Pervin
Wendy W Tang
Joseph A Hediger
Logan F Thomas
Walter E Cook
Michael J Cherry
Benjamin W Neuman
Gabriel L Hamer
Sarah A Hamer

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

White-tailed deer (Odocoileus virginianus) have high value for research, conservation, agriculture, and recreation and might be key SARS-CoV-2 reservoirs. In November 2023, we sampled 15 female deer in a captive facility in Texas, USA. All deer had neutralizing antibodies to SARS-CoV-2; respiratory swab samples from 11 deer were SARS-CoV-2-positive by quantitative reverse transcription PCR, and 1 deer also had a positive rectal swab sample. Six of the 11 respiratory swab samples yielded infectious virus; replication kinetics of most samples displayed lower growth 24-48 hours postinfection in vitro than Omicron lineages isolated from humans in Texas in the same period. Virus growth was similar between groups by 72 hours, suggesting no strong attenuation of deer-derived virus. All deer viruses clustered in XBB Omicron clade and demonstrated more mutations than expected compared with contemporaneous viruses in humans, suggesting that crossing the species barrier was accompanied by a high substitution rate.

Indexed as

COVID-19DeerSARS-CoV-2Virus SheddingAnimalsAntibodies, NeutralizingAntibodies, ViralFemaleHumansPhylogenyTexasAntibodies, NeutralizingAntibodies, Viralcoronavirus diseaseCOVID-19deerOdocoileus virginianusOne Healthrespiratory infectionsSARS-CoV-2severe acute respiratory syndrome coronavirus 2spilloverTexasUSAviruseswhole-genome sequencingzoonoses

Identifiers

PMID39983708
PMCPMC11845158

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.