Evidence map›Paper›PMID 39982740›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2025

STING-induced noncanonical autophagy regulates endolysosomal homeostasis.

Tuozhi Huang, Chenglong Sun, Fenghe Du, Zhijian J Chen

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed.

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  20. Elucidating the molecular interplay between LRRK2 and Rab GTPases.bioRxiv : the preprint server for biology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Tuozhi Huang *Department of Molecular Biology, University of Texas, Southwestern Medical Center, Dallas, TX 75390-9148.
Chenglong Sun *Department of Molecular Biology, University of Texas, Southwestern Medical Center, Dallas, TX 75390-9148.
Fenghe DuDepartment of Molecular Biology, University of Texas, Southwestern Medical Center, Dallas, TX 75390-9148.
Zhijian J ChenDepartment of Molecular Biology, University of Texas, Southwestern Medical Center, Dallas, TX 75390-9148.ORCID 0000-0002-8475-8251

Funding

UT Southwestern NORCP30DK127984 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI JONATHAN Charles COHEN · 2022 to 2026
$7.4M
Project 3U54CA244719 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI GAO, JINMING · 2019 to 2019
$5.2M
eDyNAmiC-TEXASSWOT2CA278683 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI Zhijian J Chen · 2022 to 2026
$2.4M
Novel endogenous and engineered activators of STING: from mechanisms to cancer therapyR01CA299257 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI Xiaochen Bai, Zhijian J Chen · 2025 to 2026
$1.3M
Howard Hughes Medical Institute (HHMI) ZChenNCI NIH HHS OT2 CA278683NCI NIH HHS R01 CA299257NCI NIH HHS U54 CA244719NIDDK NIH HHS P30 DK127984
6 · The paper itself

Abstract

The cGAS-STING pathway mediates innate immune responses to cytosolic DNA. In addition to its well-established role in inducing inflammatory cytokines, activation of the cGAS-STING pathway also induces noncanonical autophagy, a process involving the conjugation of the ATG8 family of ubiquitin-like proteins to membranes of the endolysosomal system. The mechanisms and functions of STING-induced autophagy remain poorly understood. In this study, we demonstrated that STING activation induced formation of pH-elevated Golgi-derived vesicles that led to ATG16L1 and V-ATPase-dependent noncanonical autophagy. We showed that STING-induced noncanonical autophagy resulted in activation of the MiT/TFE family of transcription factors (TFEB, TFE3, and MITF), which regulate lysosome biogenesis. We found that lipidation of the ATG8 proteins, particularly GABARAPs, inhibited phosphorylation of MiT/TFE transcription factors by mTORC1. The lipidated GABARAPs bound to the Folliculin-interacting proteins (FNIPs), thereby sequestering the FNIP-folliculin protein complexes from activating mTORC1, resulting in dephosphorylation and nuclear translocation of MiT/TFE transcription factors. Furthermore, we found that STING-induced autophagy activated Leucine-rich repeat kinase 2 (LRRK2), a protein implicated in Parkinson's disease, through GABARAPs lipidation. We further showed that STING-induced autophagy induced ALIX-mediated ESCRT machinery recruitment to mitigate endolysosomal perturbation. These results reveal the multifaceted functions of STING-induced noncanonical autophagy in regulating endolysosomal homeostasis.

Indexed as

AutophagyEndosomesHomeostasisLysosomesMembrane ProteinsAnimalsAutophagy-Related Protein 8 FamilyAutophagy-Related ProteinsBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsCarrier ProteinsHEK293 CellsHumansMechanistic Target of Rapamycin Complex 1MiceMicrophthalmia-Associated Transcription FactorSignal TransductionATG16L1 protein, humanAutophagy-Related Protein 8 FamilyAutophagy-Related ProteinsBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsCarrier ProteinsMechanistic Target of Rapamycin Complex 1Membrane ProteinsMicrophthalmia-Associated Transcription FactorSTING1 protein, humanSTING ProteinTFE3 protein, humanautophagycGASESCRTSTINGTFEB

Identifiers

PMID39982740
PMCPMC11874320

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.