Evidence map›Paper›PMID 39982421›Full record

ReviewThe ISME journal2025

Uncertain fate of pelagic calcifying protists: a cellular perspective on a changing ocean.

Adva Shemi, Assaf Gal, Assaf Vardi

Abstract readReview
In one paragraph

Review in The ISME journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Adva ShemiDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Herzl St 234 7610001, Rehovot, Israel.
Assaf GalDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Herzl St 234 7610001, Rehovot, Israel.
Assaf VardiDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Herzl St 234 7610001, Rehovot, Israel.

Funding

European Research Council 101053543Israel Science Foundation 974/23
6 · The paper itself

Abstract

Pelagic calcifying protists such as coccolithophores and foraminifera represent an important microbial component of the marine carbon cycle. Although their calcitic shells are preserved in oceanic sediments over millennia, their resilience in the future decades is uncertain. We review current literature describing the response of calcifying protists to ocean acidification and temperature warming. We examine these key ecological and biogeochemical processes through the cellular perspective, exploring the physiological, metabolic, and molecular responses of calcifying protists. Ocean acidification is a chemical process that takes place in the seawater outside the cell, whereas protists calcify inside a modified cellular microenvironment. The function of these calcification compartments depends on cellular response to ocean acidification, such as maintaining pH homeostasis. The response of calcifying protists to ocean acidification and temperature warming is species-specific, with no unifying trends but rather a range of sensitivity levels. Coccolithophores and foraminifera display physiological sensitivity that may hamper their ecological success in comparison to noncalcifying species. Yet, certain species may be more adaptable, especially when comparing to highly vulnerable calcifying molluscs as pteropods. As the molecular machinery mediating cellular calcification is not fully resolved, as well as the functional role of the calcitic shell, our ability to predict the fate of calcifying microorganisms in a warmer, more acidic ocean is limited. We propose the urgent need to expand the study of these model systems by advancing cell biology approaches and better understand the impact of climate change on microbial food webs in the ocean.

Indexed as

Calcification, PhysiologicForaminiferaHaptophytaSeawaterAnimalsClimate ChangeHydrogen-Ion ConcentrationOceans and SeasTemperaturealgal bloomsatlantificationcalcitecarbon cyclecarbon exportcellular calcificationclimate changeCoccolithCoccolithophoresForaminiferaGephyrocapsa huxleyiglobal warmingocean acidification

Identifiers

PMID39982421
PMCPMC12573260

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.