Evidence map›Paper›PMID 39982410›Full record

ArticlePhysiological genomics2025

Kidney cell response to acute cardiorenal and isolated kidney ischemia-reperfusion injury.

Kevin G Burfeind, Yoshio Funahashi, Xiao-Tong Su, Anne E Lackey, Matt W Hagen, Sienna Blanche, Jacqueline M Emathinger, Jessica F Hebert, Alicia A McDonough, Susan B Gurley and 2 more

Abstract read
In one paragraph

Article in Physiological genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Kevin G BurfeindDepartment of Anesthesiology and Perioperative Medicine, Oregon Health & Science University, Portland, Oregon, United States.ORCID 0000-0002-4192-6753
Yoshio FunahashiDepartment of Anesthesiology and Perioperative Medicine, Oregon Health & Science University, Portland, Oregon, United States.ORCID 0000-0003-3609-0266
Xiao-Tong SuDivision of Nephrology and Hypertension, Department of Medicine, Oregon Health & Science University, Portland, Oregon, United States.ORCID 0000-0001-8121-8105
Anne E LackeyDivision of Nephrology and Hypertension, Department of Medicine, Oregon Health & Science University, Portland, Oregon, United States.
Matt W HagenHuman Biology Division, Fred Hutchinson Cancer Center, Seattle, Washington, United States.ORCID 0000-0002-9812-2262
Sienna BlancheDivision of Nephrology and Hypertension, Department of Medicine, Keck School of Medicine of University of Southern California, Los Angeles, California, United States.
Jacqueline M EmathingerDivision of Nephrology and Hypertension, Department of Medicine, Oregon Health & Science University, Portland, Oregon, United States.
Jessica F HebertDivision of Nephrology and Hypertension, Department of Medicine, Oregon Health & Science University, Portland, Oregon, United States.
Alicia A McDonoughDepartment of Physiology and Neuroscience, Keck School of Medicine of University of Southern California, Los Angeles, California, United States.ORCID 0000-0002-0459-469X
Susan B GurleyDivision of Nephrology and Hypertension, Department of Medicine, Keck School of Medicine of University of Southern California, Los Angeles, California, United States.ORCID 0000-0002-2659-6485
Jonathan W NelsonDivision of Nephrology and Hypertension, Department of Medicine, Keck School of Medicine of University of Southern California, Los Angeles, California, United States.ORCID 0000-0003-1456-9399
Michael P HutchensDepartment of Anesthesiology and Perioperative Medicine, Oregon Health & Science University, Portland, Oregon, United States.ORCID 0000-0001-8583-1812

Funding

Oregon Clinical and Translational Research Institute - The National COVID Cohort Collaborative (N3C)UL1TR002369 · NCATS · OREGON HEALTH & SCIENCE UNIVERSITY · PI Cynthia D Morris, Christopher G. Slatore · 2017 to 2026
$78.4M
Oregon Clinical and Translational Research Institute KL2 SupplementKL2TR002370 · NCATS · OREGON HEALTH & SCIENCE UNIVERSITY · PI Catherine Lee Hough · 2017 to 2026
$10.1M
Oregon Clinical and Translational Research Institute TL1 ProgramTL1TR002371 · NCATS · OREGON HEALTH & SCIENCE UNIVERSITY · PI ALLISON Deborah FRYER, JESSINA C MCGREGOR · 2017 to 2026
$6.2M
Actions of Angiotensin II Along the Nephron to Regulate Blood PressureR01DK098382 · NIDDK · UNIVERSITY OF SOUTHERN CALIFORNIA · PI GURLEY, SUSAN BAILEY · 2014 to 2025
$3.8M
Renal Pericytes as a Target for Angiotensin II Signaling in HypertensionK01DK121737 · NIDDK · UNIVERSITY OF SOUTHERN CALIFORNIA · PI NELSON, JONATHAN W · 2020 to 2024
$669k
American Heart Association (AHA) 20CDA35320169American Heart Association (AHA) 24CDA1269598BLRD VA I01 BX004288Collins Medical Trust (CMT)HHS | NIH | National Center for Advancing Translational Sciences (NCATS) KL2TR002370HHS | NIH | National Center for Advancing Translational Sciences (NCATS) TL1TR002371HHS | NIH | National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK) K01DK121737NCATS NIH HHS KL2 TR002370NCATS NIH HHS TL1 TR002371NCATS NIH HHS UL1 TR002369NIDDK NIH HHS K01 DK121737NIDDK NIH HHS R01 DK098382U.S. Department of Defense (DOD) W81XWH2010196/PR191304U.S. Department of Veterans Affairs (VA) I01BX004288
6 · The paper itself

Abstract

Acute cardiorenal syndrome (CRS) represents a critical intersection of cardiac and renal dysfunction with profound clinical implications. Despite its significance, the molecular underpinnings that mediate cellular responses within the kidney during CRS remain inadequately understood. We used single nucleus RNA sequencing (snRNAseq) to dissect the cellular transcriptomic landscape of the kidney following a translational model of CRS, cardiac arrest/cardiopulmonary resuscitation (CA/CPR) in comparison to ischemia-reperfusion injury (IRI). In each dataset, we found that proximal tubule (PT) cells of the kidney undergo significant gene expression changes, with decreased expression of genes critically important for cell identity and function, indicative of dedifferentiation. Based on this, we created a novel score to capture the dedifferentiation state of each kidney cell population and found that certain epithelial cell populations, such as the PT S1 and S2 segments, as well as the distal convoluted tubule, exhibited significant dedifferentiation response. Interestingly, the dedifferentiation response in the distal nephron differed in magnitude between IRI and CA/CPR. Gene set enrichment analysis (GSEA) of PT response to IRI and CA/CPR revealed similarities between the two models and key differences, including enrichment of immune system process genes. Transcriptional changes in both mouse models of acute kidney injury (AKI) highly correlated with a dataset of human biopsies from patients diagnosed with AKI. This comprehensive single-nucleus transcriptomic profiling provides valuable insights into the cellular mechanisms driving CRS.

Indexed as

Cardio-Renal SyndromeKidneyReperfusion InjuryAcute Kidney InjuryAnimalsCardiopulmonary ResuscitationDisease Models, AnimalGene Expression ProfilingHeart ArrestHumansKidney Tubules, ProximalMaleMiceMice, Inbred C57BLTranscriptomeacute cardiorenal syndromeacute kidney injuryischemia-reperfusionsingle nucleus RNA sequencingtranscriptomics

Identifiers

PMID39982410
PMCPMC12191245

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.