Evidence map›Paper›PMID 39980564›Full record

ArticleFrontiers in oncology2025

A pan-cancer analysis of homeobox family: expression characteristics and latent significance in prognosis and immune microenvironment.

Yuanhui Wang, Jie Gao, Ziyi Ren, Ziyi Shen, Wei Gu, Qinyi Miao, Xiaomeng Hu, Yan Wu, Wei Liu, Jia Jia and 4 more

Abstract read
In one paragraph

Article in Frontiers in oncology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Article
  3. Translational andrology and urology · 2026
    Article
  4. Article
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Yuanhui WangSchool of Life Sciences, Shanghai University, Shanghai, China.
Jie GaoSchool of Life Sciences, Shanghai University, Shanghai, China.
Ziyi RenSchool of Life Sciences, Shanghai University, Shanghai, China.
Ziyi ShenSchool of Life Sciences, Shanghai University, Shanghai, China.
Wei GuTranslational Medicine Center, Zhejiang Xinda Hospital, School of Medicine&Nursing, Huzhou University, Huzhou, China.
Qinyi MiaoSchool of Life Sciences, Shanghai University, Shanghai, China.
Xiaomeng HuTranslational Medicine Center, Zhejiang Xinda Hospital, School of Medicine&Nursing, Huzhou University, Huzhou, China.
Yan WuTranslational Medicine Center, Zhejiang Xinda Hospital, School of Medicine&Nursing, Huzhou University, Huzhou, China.
Wei LiuUniversity and College Key Lab of Natural Product Chemistry and Application in Xinjiang, School of Chemistry and Environmental Science, Yili Normal University, Yining, China.
Jia JiaSchool of Life Sciences, Shanghai University, Shanghai, China.
Yi CaiKey Laboratory of Molecular Target & Clinical Pharmacology and the State & National Medical Products Administration (NMPA) Key Laboratory of Respiratory Disease, School of Pharmaceutical Sciences & The Fifth Affiliated Hospital, Guangzhou Medical University, Guangzhou, China.
Chunpeng Craig WanJiangxi Key Laboratory for Postharvest Technology and Nondestructive Testing of Fruits and Vegetables, College of Agronomy, Jiangxi Agricultural University, Nanchang, China.
Lei SunDepartment of Pathology, Beijing Ditan Hospital, Capital Medical University, Beijing, China.
Tingdong YanSchool of Life Sciences, Shanghai University, Shanghai, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: The Homeobox (HOX) gene family are conserved transcription factors that are essential for embryonic development, oncogenesis, and cancer suppression in biological beings. Abnormally expressed HOX genes in cancers are directly associated with prognosis. Methods: Public databases such as TCGA and the R language were used to perform pan-cancer analyses of the HOX family in terms of expression, prognosis, and immune microenvironment. The HOX score was defined, and potential target compounds in cancers were predicted by Connective Map. Immunohistochemistry was employed to validate protein expression levels. Gene knockdowns were used to verify the effects of HOXB7 and HOXC6 on the proliferation and migration of lung adenocarcinoma (LUAD) cells. Results: HOX genes play different roles in different cancers. Many HOX genes, especially HOXB7 and HOXC6, have higher expression and lower overall survival in specific cancers and are predicted as risk factors. The high expression of most HOX genes is mainly related to immune subtypes C1-C4 and C6. Potential anti-tumor compounds for down-regulating HOX gene expression were identified, such as HDAC inhibitors and tubulin inhibitors. LUAD Cell migration and proliferation were inhibited when HOXB7 or HOXC6 was knocked down. Conclusions: Many HOX genes may act as both oncogenes and tumor suppressor genes, necessitating precision medicine based on specific cancers. The HOX gene family plays a crucial role in the development of certain cancers, and their expression patterns are closely related to cancer prognosis and the tumor microenvironment (TME), which may affect cancer prognosis and response to immunotherapy. Compounds that are negatively correlated with the expression levels of the HOX family in various cancers, such as HDAC inhibitors, are potential anti-cancer drugs. HOXB7 and HOXC6 may serve as potential targets for cancer treatment and the development of targeted compounds in the future.

Indexed as

Homeobox familyHOXB7HOXC6immune microenvironmentpan-cancerprognosis

Identifiers

PMID39980564
PMCPMC11840236

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