Evidence map›Paper›PMID 39978339›Full record

ArticleMolecular cell2025

Molecular basis of promiscuous chemokine binding and structural mimicry at the C-X-C chemokine receptor, CXCR2.

Shirsha Saha, Fumiya K Sano, Saloni Sharma, Manisankar Ganguly, Sudha Mishra, Annu Dalal, Hiroaki Akasaka, Takaaki A Kobayashi, Nashrah Zaidi, Divyanshu Tiwari and 11 more

Abstract read
In one paragraph

Article in Molecular cell, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Adipocyte-Derived Leptolin Enhances Energy Expenditure and Prevents Obesity.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  2. SpyCEP dismantles neutrophil immunity via disorder-driven chemokine remodeling and GAG targeting.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. Structure basis for C-C chemokine receptor 4 modulation by orthosteric and allosteric antagonists.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Shirsha SahaDepartment of Biological Sciences, Indian Institute of Technology Kanpur, Kanpur, India.
Fumiya K SanoDepartment of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan.
Saloni SharmaDepartment of Biological Sciences, Indian Institute of Technology Kanpur, Kanpur, India.
Manisankar GangulyDepartment of Biological Sciences, Indian Institute of Technology Kanpur, Kanpur, India.
Sudha MishraDepartment of Biological Sciences, Indian Institute of Technology Kanpur, Kanpur, India.
Annu DalalDepartment of Biological Sciences, Indian Institute of Technology Kanpur, Kanpur, India.
Hiroaki AkasakaDepartment of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan.
Takaaki A KobayashiDepartment of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan.
Nashrah ZaidiDepartment of Biological Sciences, Indian Institute of Technology Kanpur, Kanpur, India.
Divyanshu TiwariDepartment of Biological Sciences, Indian Institute of Technology Kanpur, Kanpur, India.
Nabarun RoyDepartment of Biological Sciences, Indian Institute of Technology Kanpur, Kanpur, India.
Manish K YadavDepartment of Biological Sciences, Indian Institute of Technology Kanpur, Kanpur, India.
Nilanjana BanerjeeDepartment of Biological Sciences, Indian Institute of Technology Kanpur, Kanpur, India.
Sayantan SahaDepartment of Biological Sciences, Indian Institute of Technology Kanpur, Kanpur, India.
Samanwita MohapatraDepartment of Biological Sciences, Indian Institute of Technology Kanpur, Kanpur, India.
Yuzuru ItohDepartment of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan.
Andy ChevignéImmuno-Pharmacology and Interactomics, Department of Infection and Immunity, Luxembourg Institute of Health, Esch-sur-Alzette, Luxembourg.
Ramanuj BanerjeeDepartment of Biological Sciences, Indian Institute of Technology Kanpur, Kanpur, India. Electronic address: ramanuj.banerjee.sinp@gmail.com.
Wataru ShihoyaDepartment of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan. Electronic address: wtrshh9@gmail.com.
Osamu NurekiDepartment of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan. Electronic address: nureki@bs.s.u-tokyo.ac.jp.
Arun K ShuklaDepartment of Biological Sciences, Indian Institute of Technology Kanpur, Kanpur, India. Electronic address: arshukla@iitk.ac.in.

Funding

DBT-Wellcome Trust India Alliance IA/S/20/1/504916Wellcome Trust
6 · The paper itself

Abstract

Selectivity of natural agonists for their cognate receptors is a hallmark of G-protein-coupled receptors (GPCRs); however, this selectivity often breaks down at the chemokine receptors. Chemokines often display promiscuous binding to chemokine receptors, but the underlying molecular determinants remain mostly elusive. Here, we perform a comprehensive transducer-coupling analysis, testing all known C-X-C chemokines on every C-X-C type chemokine receptor to generate a global fingerprint of the selectivity and promiscuity encoded within this system. Taking lead from this, we determine cryoelectron microscopy (cryo-EM) structures of the most promiscuous receptor, C-X-C chemokine receptor 2 (CXCR2), in complex with several chemokines. These structural snapshots elucidate the details of ligand-receptor interactions, including structural motifs, which are validated using mutagenesis and functional experiments. We also observe that most chemokines position themselves on CXCR2 as a dimer while CXCL6 exhibits a monomeric binding pose. Taken together, our findings provide the molecular basis of chemokine promiscuity at CXCR2 with potential implications for developing therapeutic molecules.

Indexed as

ChemokinesReceptors, Interleukin-8BBinding SitesCryoelectron MicroscopyHEK293 CellsHumansLigandsModels, MolecularMolecular MimicryProtein BindingProtein MultimerizationChemokinesCXCR2 protein, humanLigandsReceptors, Interleukin-8Bbiased signalingchemokine receptorscryo-EMdimerizationdrug discoveryGPCRsligand promiscuitysignal transductionstructural mimicryβ-arrestin

Identifiers

PMID39978339
PMCPMC7617694

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.