Evidence map›Paper›PMID 39976165›Full record

ArticleThe Journal of experimental biology2025

High-resolution, high-throughput analysis of Drosophila geotactic behavior.

Tijana Canic, Juan Lopez, Natalie Ortiz-Vega, R Grace Zhai, Sheyum Syed

Abstract read
In one paragraph

Article in The Journal of experimental biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Tijana CanicDepartment of Physics, University of Miami, Coral Gables, FL 33146, USA.
Juan LopezDepartment of Physics, University of Miami, Coral Gables, FL 33146, USA.
Natalie Ortiz-VegaDepartment of Molecular and Cellular Pharmacology, University of Miami Miller School of Medicine, Miami, FL 33136, USA.
R Grace ZhaiDepartment of Molecular and Cellular Pharmacology, University of Miami Miller School of Medicine, Miami, FL 33136, USA.ORCID 0000-0002-7599-1430
Sheyum SyedDepartment of Physics, University of Miami, Coral Gables, FL 33146, USA.ORCID 0000-0002-4642-6678

Funding

IRACDA at the University of ChicagoK12GM146658 · NIGMS · UNIVERSITY OF CHICAGO · PI PHOEBE A RICE, NANCY B SCHWARTZ · 2022 to 2026
$2.4M
microRNA regulation of NMNAT-mediated Neuroprotection against Peripheral Neuropathy and Chronic PainR33AT010408 · NCCIH · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI ZHAI, RONG GRACE · 2022 to 2024
$2.1M
National Science Foundation 2131037NCCIH NIH HHS R33 AT010408NIGMS NIH HHS K12 GM146658NIH HHS R33AT010408University of Miami
6 · The paper itself

Abstract

Drosophila's innate response to gravity, geotaxis, has been used to assess the impact of aging and disease on motor performance. Despite its rich history, fly geotaxis continues to be largely measured manually and assessed through simplistic metrics, limiting analytic insights into the behavior. Here, we have constructed a fully programmable apparatus and developed a multi-object tracking software capable of following sub-second movements of individual flies, thus allowing quantitative analysis of geotaxis. The apparatus monitors 10 fly cohorts simultaneously, with each cohort consisting of up to 7 flies. The software tracks single flies during the entire run with ∼97% accuracy, yielding detailed climbing curve, speed and movement direction with 1/30 s resolution. Our tracking permits the construction of multi-variable metrics and the detection of transitory movement phenotypes, such as slips and falls. The platform is therefore poised to advance Drosophila geotaxis assay into a comprehensive assessment of locomotor behavior.

Indexed as

Drosophila melanogasterLocomotionAnimalsBehavior, AnimalSoftwareDrosophilaGeotaxisKalman filterMulti-object trackingSlips and falls

Identifiers

PMID39976165
PMCPMC11883285

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.