Evidence map›Paper›PMID 39975499›Full record

ArticleJournal of the Medical Library Association : JMLA2025

Filtering failure: the impact of automated indexing in Medline on retrieval of human studies for knowledge synthesis.

Nicole Askin, Tyler Ostapyk, Carla Epp

Abstract read
In one paragraph

Article in Journal of the Medical Library Association : JMLA, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Nicole AskinNicole.askin@umanitoba.ca, University of Manitoba, Manitoba, Canada.
Tyler Ostapyktyler.ostapyk@umanitoba.ca, University of Manitoba, Manitoba, Canada.
Carla EppCarla.epp@umanitoba.ca, University of Manitoba, Manitoba, Canada.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objective: Use of the search filter 'exp animals/not humans.sh' is a well-established method in evidence synthesis to exclude non-human studies. However, the shift to automated indexing of Medline records has raised concerns about the use of subject-heading-based search techniques. We sought to determine how often this string inappropriately excludes human studies among automated as compared to manually indexed records in Ovid Medline. Methods: We searched Ovid Medline for studies published in 2021 and 2022 using the Cochrane Highly Sensitive Search Strategy for randomized trials. We identified all results excluded by the non-human-studies filter. Records were divided into sets based on indexing method: automated, curated, or manual. Each set was screened to identify human studies. Results: Human studies were incorrectly excluded in all three conditions, but automated indexing inappropriately excluded human studies at nearly double the rate as manual indexing. In looking specifically at human clinical randomized controlled trials (RCTs), the rate of inappropriate exclusion of automated-indexing records was seven times that of manually-indexed records. Conclusions: Given our findings, searchers are advised to carefully review the effect of the 'exp animals/not humans.sh' search filter on their search results, pending improvements to the automated indexing process.

Indexed as

Abstracting and IndexingInformation Storage and RetrievalMEDLINEHumansMedical Subject HeadingsAbstract and IndexingAutomated IndexingEvidence SynthesisMedical Subject Headings (MeSH)

Identifiers

PMID39975499
PMCPMC11835038

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.