Evidence map›Paper›PMID 39975188›Full record

ArticlebioRxiv : the preprint server for biology2025

Directed Evolution of a Plant Immune Receptor for Broad Spectrum Effector Recognition.

Ellen Y Rim, Oscar D Garrett, Alexander J Howard, Yejin Shim, Yuanyuan Li, Jonathan E Van Dyke, Ryan C Packer, Nguyen Ho, Rashmi Jain, Valley Stewart and 3 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Ellen Y RimDepartment of Plant Pathology and the Genome Center, University of California, Davis, CA, 95616, USA.ORCID 0000-0002-4192-5750
Oscar D GarrettDepartment of Plant Pathology and the Genome Center, University of California, Davis, CA, 95616, USA.ORCID 0000-0002-7597-5203
Alexander J HowardDepartment of Plant Pathology and the Genome Center, University of California, Davis, CA, 95616, USA.ORCID 0009-0005-8810-0966
Yejin ShimDepartment of Plant Pathology and the Genome Center, University of California, Davis, CA, 95616, USA.ORCID 0000-0003-1464-2760
Yuanyuan LiDepartment of Plant Biology and the Genome Center, University of California, Davis, CA, 95616, USA.ORCID 0000-0001-8615-4374
Jonathan E Van DykeFlow Cytometry Shared Resource Laboratory, University of California, Davis, CA, 95616, USA.ORCID 0000-0002-9180-4295
Ryan C PackerDepartment of Plant Pathology and the Genome Center, University of California, Davis, CA, 95616, USA.ORCID 0000-0001-7472-8115
Nguyen HoDepartment of Plant Pathology and the Genome Center, University of California, Davis, CA, 95616, USA.
Rashmi JainDepartment of Plant Pathology and the Genome Center, University of California, Davis, CA, 95616, USA.ORCID 0000-0001-6819-847X
Valley StewartDepartment of Microbiology and Molecular Genetics, University of California, Davis, CA, 95616, USA.ORCID 0000-0002-0031-0020
Savithramma P Dinesh-KumarDepartment of Plant Biology and the Genome Center, University of California, Davis, CA, 95616, USA.ORCID 0000-0001-5738-316X
James H NotwellDepartment of Plant Pathology and the Genome Center, University of California, Davis, CA, 95616, USA.ORCID 0000-0003-3417-5856
Pamela C RonaldDepartment of Plant Pathology and the Genome Center, University of California, Davis, CA, 95616, USA.ORCID 0000-0002-4107-1345

Funding

Staff InvestigatorsP30CA093373 · NCI · UNIVERSITY OF CALIFORNIA DAVIS · PI Gina M Dayton · 2002 to 2026
$84.9M
Sulfotyrosine, an essential determinant for diverse protein-protein interactionsR35GM148173 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI PAMELA C RONALD · 2023 to 2026
$1.8M
UC Davis Shared Astrios Cell SorterS10OD018223 · OD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI SHACKLETT, BARBARA L. · 2015 to 2015
$555k
Shared LSRII Cytometer Equipment Application - UC Davis Stem Cell ProgramS10RR026825 · NCRR · UNIVERSITY OF CALIFORNIA AT DAVIS · PI NOLTA, JAN A. · 2010 to 2010
$500k
NCI NIH HHS P30 CA093373NCRR NIH HHS S10 RR026825NIGMS NIH HHS R35 GM148173NIH HHS S10 OD018223
6 · The paper itself

Abstract

Rapid development of immune receptors that protect crops from emerging pathogens is a critical challenge

Identifiers

PMID39975188
PMCPMC11838462

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.