Evidence map›Paper›PMID 39975051›Full record

ArticlebioRxiv : the preprint server for biology2025

Identification of a RAB32-LRMDA-Commander membrane trafficking complex reveals the molecular mechanism of human oculocutaneous albinism type 7.

Rebeka Butkovič, Michael D Healy, Cecilia de Heus, Alexander P Walker, Wyatt Beyers, Kerrie E McNally, Philip A Lewis, Kate J Heesom, Nalan Liv, Judith Klumperman and 3 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors.

Rebeka ButkovičSchool of Biochemistry, Faculty of Life Sciences, Biomedical Sciences Building, University of Bristol, Bristol BS8 1TD, UK.
Michael D HealyCentre for Cell Biology of Chronic Disease, Institute for Molecular Biosciences, The University of Queensland, St. Lucia, QLD 4072, Australia.
Cecilia de HeusCenter for Molecular Medicine, University Medical Center Utrecht, Utrecht University, 3584 CX Utrecht, The Netherlands.
Alexander P WalkerSchool of Biochemistry, Faculty of Life Sciences, Biomedical Sciences Building, University of Bristol, Bristol BS8 1TD, UK.
Wyatt BeyersDepartment of Biochemistry and Molecular Biology, Colorado State University, 111 MRC Building, 1870 Campus Delivery, Fort Collins, Colorado 80523-1870, USA.
Kerrie E McNallyMRC Laboratory of Molecular Biology, Cambridge, UK.
Philip A LewisBristol Proteomics Facility, School of Biochemistry, Faculty of Life Sciences, Biomedical Sciences Building, University of Bristol, Bristol BS8 1TD, UK.
Kate J HeesomBristol Proteomics Facility, School of Biochemistry, Faculty of Life Sciences, Biomedical Sciences Building, University of Bristol, Bristol BS8 1TD, UK.
Nalan LivCenter for Molecular Medicine, University Medical Center Utrecht, Utrecht University, 3584 CX Utrecht, The Netherlands.ORCID 0000-0003-2654-9117
Judith KlumpermanCenter for Molecular Medicine, University Medical Center Utrecht, Utrecht University, 3584 CX Utrecht, The Netherlands.
Santiago Di PietroDepartment of Biochemistry and Molecular Biology, Colorado State University, 111 MRC Building, 1870 Campus Delivery, Fort Collins, Colorado 80523-1870, USA.
Brett M CollinsCentre for Cell Biology of Chronic Disease, Institute for Molecular Biosciences, The University of Queensland, St. Lucia, QLD 4072, Australia.ORCID 0000-0002-6070-3774
Peter J CullenSchool of Biochemistry, Faculty of Life Sciences, Biomedical Sciences Building, University of Bristol, Bristol BS8 1TD, UK.

Funding

Molecular Mechanisms of Platelet Alpha Granule BiogenesisR01HL151988 · NHLBI · COLORADO STATE UNIVERSITY · PI DI PIETRO, SANTIAGO MAURO · 2021 to 2024
$1.5M
NHLBI NIH HHS R01 HL151988Wellcome Trust
6 · The paper itself

Abstract

Commander is an endosome associated sixteen protein assembly that associates with the sorting nexin 17 (SNX17) cargo adaptor to regulate cell surface recycling of internalised integral membrane proteins including integrins and lipoprotein receptors. Mutations in Commander are causative for Ritscher-Schinzel syndrome (RSS), a multiorgan developmental disease associated with a core triad of cerebellar-cardiac-craniofacial malformation. Here, using unbiased proteomics and computational modelling, we identify leucine rich melanocyte differentiation associated (LRMDA) as a novel Commander binding protein. Using recombinant protein reconstitution, we show that LRMDA simultaneously associates with Commander and active RAB32, and, by revealing that LRMDA and SNX17 share a common mechanism of Commander association, establish the mutually exclusive nature of RAB32-LRMDA-Commander and SNX17-Commander assemblies. From functional analysis in human melanocytes, we establish an essential role for RAB32-LRMDA-Commander in melanosome biogenesis and pigmentation and reveal a distinct functional role for SNX17-Commander in this organelle biogenesis pathway. We reveal how LRMDA mutations, causative for oculocutaneous albinism type 7 (OCA7), a hypopigmentation disorder accompanied by poor visual acuity, uncouple RAB32 and Commander binding thereby establishing the mechanistic basis of this disease. Our discovery and characterisation of this alternative Commander assembly establishes an unrecognised plasticity of Commander function within a highly complex organelle biogenesis pathway. This extends Commander function beyond the confines of SNX17-mediated cell surface recycling into RAB32-family mediated biogenesis of lysosome-related organelles and, potentially, other RAB32 regulated pathways including host-pathogen defence mechanisms. Our work also extends the breath of Commander pathway dysfunction for human disease.

Identifiers

PMID39975051
PMCPMC11838575

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