Evidence map›Paper›PMID 39974086›Full record

ArticlemedRxiv : the preprint server for health sciences2025

Wavelet-Based Compression Method for Scale-Preserving SWIR Hyperspectral Data.

Hridoy Biswas, Rui Tang, Shamim Mollah, Mikhail Y Berezin

Abstract readPreprint
In one paragraph

Article in medRxiv : the preprint server for health sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Hridoy BiswasDepartment of Radiology, Washington University School of Medicine, St. Louis MO.
Rui TangDepartment of Radiology, Washington University School of Medicine, St. Louis MO.
Shamim MollahHSpeQ LLC, St. Louis, MO.
Mikhail Y BerezinDepartment of Radiology, Washington University School of Medicine, St. Louis MO.ORCID 0000-0002-2670-2487

Funding

Acoustic platform for separation, isolation, and enrichment in biomedical researchR01GM141344 · NIGMS · WASHINGTON UNIVERSITY · PI MEACHAM, JOHN MARK · 2022 to 2025
$1.5M
Molecular and cellular imaging of bone biopsies using AI augmented deep UV Raman microscopyR21CA269099 · NCI · TEXAS ENGINEERING EXPERIMENT STATION · PI BEREZIN, MIKHAIL Y., YAKOVLEV, VLADISLAV V. · 2022 to 2024
$577k
In vivo Visualization of Delayed Wallerian Degeneration in Peripheral Nerve InjuryR21NS135646 · NINDS · WASHINGTON UNIVERSITY · PI BEREZIN, MIKHAIL Y. · 2024 to 2025
$421k
FLUORESCENCE SPECTROPHOTOMETER IN NIR RANGE FOR BIOLOGICAL AND MEDICAL APPLICATIOS10RR031621 · NCRR · WASHINGTON UNIVERSITY · PI BEREZIN, MIKHAIL Y. · 2011 to 2011
$292k
NCI NIH HHS R21 CA269099NCRR NIH HHS S10 RR031621NIGMS NIH HHS R01 GM141344NINDS NIH HHS R21 NS135646
6 · The paper itself

Abstract

Purpose: Hyperspectral imaging (HSI) collects detailed spectral information across hundreds of narrow bands, providing valuable datasets for applications such as medical diagnostics. However, the large size of HSI datasets, often exceeding several gigabytes, creates significant challenges in data transmission, storage, and processing. This study aims to develop a wavelet-based compression method that addresses these challenges while preserving the integrity and quality of spectral information. Approach: The proposed method applies wavelet transforms to the spectral dimension of hyperspectral data in three steps: 1) wavelet transformation for dimensionality reduction, 2) spectral cropping to eliminate low-intensity bands, and 3) scale matching to maintain accurate wavelength mapping. Daubechies wavelets were used to achieve up to 32x compression while ensuring spectral fidelity and spatial feature retention. Results: The wavelet-based method achieved up to 32x compression, corresponding to a 96.88% reduction in data size without significant loss of important data. Unlike PCA and ICA, the method preserved the original wavelength scale, enabling straightforward spectral interpretation. Additionally, the compressed data exhibited minimal loss in spatial features, with improvements in contrast and noise reduction compared to spectral binning. Conclusions: This study demonstrates that wavelet-based compression is an effective solution for managing large HSI datasets in medical imaging. The method preserves critical spectral and spatial information, and therefore facilitates efficient data storage and processing, providing the way for practical integration of HSI technology in clinical applications.

Indexed as

data reductionDaubechies waveletsHyperspectral imagingnoise reductionshortwave infraredspectral fidelitySWIRwavelet compression

Identifiers

PMID39974086
PMCPMC11838637

What OpenQuestion holds

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LicenceCC BY-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.