Evidence map›Paper›PMID 39972214›Full record

ArticleNature genetics2025

Plasma proteome variation and its genetic determinants in children and adolescents.

Lili Niu, Sara Elizabeth Stinson, Louise Aas Holm, Morten Asp Vonsild Lund, Cilius Esmann Fonvig, Leonardo Cobuccio, Jonas Meisner, Helene Bæk Juel, Joao Fadista, Maja Thiele and 5 more

Abstract read
In one paragraph

Article in Nature genetics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Preprocessing Large-Scale Proteomics Data.Methods in molecular biology (Clifton, N.J.) · 2027
    Article
  3. Article
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  8. Proteogenomics in human populations.Nature reviews. Genetics · 2026
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Lili NiuNovo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen, Denmark.ORCID http://orcid.org/0000-0003-4571-4368
Sara Elizabeth StinsonNovo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, Copenhagen, Denmark.ORCID http://orcid.org/0000-0002-1491-9179
Louise Aas HolmNovo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, Copenhagen, Denmark.ORCID http://orcid.org/0000-0002-5439-5429
Morten Asp Vonsild LundThe Children's Obesity Clinic, accredited European Centre for Obesity Management, Department of Pediatrics, Copenhagen University Hospital Holbæk, Holbæk, Denmark.ORCID http://orcid.org/0000-0002-2711-1259
Cilius Esmann FonvigNovo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, Copenhagen, Denmark.
Leonardo CobuccioNovo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen, Denmark.
Jonas MeisnerNovo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen, Denmark.
Helene Bæk JuelNovo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, Copenhagen, Denmark.
Joao FadistaNovo Nordisk A/S, Copenhagen, Denmark.
Maja ThieleOdense Liver Research Centre, Department of Gastroenterology and Hepatology, Odense University Hospital, Odense, Denmark.
Aleksander KragOdense Liver Research Centre, Department of Gastroenterology and Hepatology, Odense University Hospital, Odense, Denmark.
Jens-Christian HolmNovo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, Copenhagen, Denmark.ORCID http://orcid.org/0000-0003-4653-342X
Simon RasmussenNovo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen, Denmark. srasmuss@sund.ku.dk.ORCID http://orcid.org/0000-0001-6323-9041
Torben HansenNovo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, Copenhagen, Denmark. torben.hansen@sund.ku.dk.ORCID http://orcid.org/0000-0001-8748-3831
Matthias MannNovo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen, Denmark. mmann@biochem.mpg.de.ORCID http://orcid.org/0000-0003-1292-4799

Funding

EC | Horizon 2020 Framework Programme (EU Framework Programme for Research and Innovation H2020) 668031Novo Nordisk Fonden (Novo Nordisk Foundation) NNF14CC0001Novo Nordisk Fonden (Novo Nordisk Foundation) NNF15CC0001Novo Nordisk Fonden (Novo Nordisk Foundation) NNF15OC0016544Novo Nordisk Fonden (Novo Nordisk Foundation) NNF15OC0016692Novo Nordisk Fonden (Novo Nordisk Foundation) NNF18SA0034956Novo Nordisk Fonden (Novo Nordisk Foundation) NNF20OC0059393Novo Nordisk Fonden (Novo Nordisk Foundation) NNF21SA0072102Region Sjælland (Region Zealand) R32-A1191
6 · The paper itself

Abstract

Our current understanding of the determinants of plasma proteome variation during pediatric development remains incomplete. Here, we show that genetic variants, age, sex and body mass index significantly influence this variation. Using a streamlined and highly quantitative mass spectrometry-based proteomics workflow, we analyzed plasma from 2,147 children and adolescents, identifying 1,216 proteins after quality control. Notably, the levels of 70% of these were associated with at least one of the aforementioned factors, with protein levels also being predictive. Quantitative trait loci (QTLs) regulated at least one-third of the proteins; between a few percent and up to 30-fold. Together with excellent replication in an additional 1,000 children and 558 adults, this reveals substantial genetic effects on plasma protein levels, persisting from childhood into adulthood. Through Mendelian randomization and colocalization analyses, we identified 41 causal genes for 33 cardiometabolic traits, emphasizing the value of protein QTLs in drug target identification and disease understanding.

Indexed as

Blood ProteinsGenetic VariationProteomeAdolescentAdultBody Mass IndexChildChild, PreschoolFemaleGenome-Wide Association StudyHumansMaleMendelian Randomization AnalysisProteomicsQuantitative Trait LociBlood ProteinsProteome

Identifiers

PMID39972214
PMCPMC11906355

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.