Evidence map›Paper›PMID 39971983›Full record

ArticleScientific data2025

Gene expression atlas of the Colorado potato beetle (Leptinotarsa decemlineata).

Léonore Wilhelm, Yangzi Wang, Shuqing Xu

Abstract readDataset
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Léonore WilhelmInstitute of Organismic and Molecular Evolution (iomE), Johannes Gutenberg University, 55128, Mainz, Germany.ORCID http://orcid.org/0009-0005-7273-1034
Yangzi WangInstitute of Organismic and Molecular Evolution (iomE), Johannes Gutenberg University, 55128, Mainz, Germany.ORCID http://orcid.org/0000-0003-2146-515X
Shuqing XuInstitute of Organismic and Molecular Evolution (iomE), Johannes Gutenberg University, 55128, Mainz, Germany. shuqing.xu@uni-mainz.de.ORCID http://orcid.org/0000-0001-7010-4604

Funding

Deutsche Forschungsgemeinschaft (German Research Foundation) 407023052Deutsche Forschungsgemeinschaft (German Research Foundation) GRK2526
6 · The paper itself

Abstract

The Colorado potato beetle (CPB) is a major pest of potato crops, known for its remarkable ability to develop resistance to more than 50 pesticides. For decades, CPB has served as a model species for studying insecticide resistance, insect physiology, diapause, reproduction, and evolution. However, research progress on CPB has been hindered by the lack of comprehensive genomic and transcriptomic resources. Here, leveraging a recently established chromosome-level genome assembly, we constructed a gene expression atlas of CPB using transcriptomic data from 61 samples representing major organs and developmental stages. By integrating short- and long-read sequencing technologies, we enhanced the genome annotation and identified 6,623 additional genes that were previously undetected. Furthermore, we developed a web portal to facilitate the search and visualization of the gene expression atlas, providing an accessible resource for the research community. The CPB gene expression atlas offers valuable tools and comprehensive data that will accelerate future research in pest control and insect biology.

Indexed as

ColeopteraTranscriptomeAnimalsGenome, Insect

Identifiers

PMID39971983
PMCPMC11840028

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.