Evidence map›Paper›PMID 39969192›Full record

ArticlemBio2025

Large diversity in the O-chain biosynthetic cluster within populations of Pelagibacterales.

Jose M Haro-Moreno, Mario López-Pérez, Carmen Molina-Pardines, Francisco Rodriguez-Valera

Abstract read
In one paragraph

Article in mBio, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jose M Haro-MorenoEvolutionary Genomics Group, División de Microbiología, Universidad Miguel Hernández, Alicante, Spain.ORCID 0000-0002-2113-9269
Mario López-PérezEvolutionary Genomics Group, División de Microbiología, Universidad Miguel Hernández, Alicante, Spain.ORCID 0000-0002-3996-6780
Carmen Molina-PardinesEvolutionary Genomics Group, División de Microbiología, Universidad Miguel Hernández, Alicante, Spain.
Francisco Rodriguez-ValeraEvolutionary Genomics Group, División de Microbiología, Universidad Miguel Hernández, Alicante, Spain.ORCID 0000-0002-9809-2059

Funding

Ministerio de Ciencia e Innovación (MCIN) PRE2021-098122Ministerio de Economía, Industria y Competitividad PID2020-118052GB-I00Ministerio de Universidades (MU) 2021/PER/00020
6 · The paper itself

Abstract

Genomic diversity in prokaryotic species is largely due to the existence of extensive pangenomes, allowing different gene complements to be drawn depending on the strain. Here, we have studied the diversity of the O-chain polysaccharide biosynthesis cluster (OBC) in marine bacteria of the Pelagibacterales order as a proxy to measure such genetic diversity in a single population. The study of single-amplified genomes (SAGs) from the whole order found a pattern similar to that of other well-studied microbes, such as the Enterobacteriales or

Indexed as

Biosynthetic PathwaysGenetic VariationMultigene FamilyO AntigensGenome, BacterialMetagenomicsPhylogenyO Antigensgenomic islandslipopolysaccharide (LPS)O-antigenPacBio metagenomicsPelagibacteralesSAR11single-amplified genomes

Identifiers

PMID39969192
PMCPMC11898729

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.