Evidence map›Paper›PMID 39966730›Full record

ArticleBMC plant biology2025

Regulation of co-translational mRNA decay by PAP and DXO1 in Arabidopsis.

Marie-Christine Carpentier, Anne-Elodie Receveur, Adrien Cadoudal, Rémy Merret

Abstract read
In one paragraph

Article in BMC plant biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. mNature plants · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Marie-Christine CarpentierCNRS-LGDP UMR 5096, 58 avenue Paul Alduy, Perpignan, 66860, France.
Anne-Elodie ReceveurCNRS-LGDP UMR 5096, 58 avenue Paul Alduy, Perpignan, 66860, France.
Adrien CadoudalCNRS-LGDP UMR 5096, 58 avenue Paul Alduy, Perpignan, 66860, France.
Rémy MerretInstitut de biologie moléculaire des plantes, CNRS, Université de Strasbourg, Strasbourg, France. remy.merret@cnrs.fr.ORCID http://orcid.org/0000-0002-3790-1115

Funding

Agence Nationale de la Recherche ANR-21-CE20-0003
6 · The paper itself

Abstract

backgroundmRNA decay is central in the regulation of mRNA homeostasis in the cell. The recent discovery of a co-translational mRNA decay pathway (also called CTRD) has changed our understanding of the mRNA decay process. This pathway has emerged as an evolutionarily conversed mechanism essential for specific physiological processes in eukaryotes, especially in plants. In Arabidopsis, this pathway is targeted mainly by the exoribonuclease XRN4. However, the details of the molecular regulation of this pathway are still unclear.

resultsIn this study, we first tested the role of the 3'-phosphoadenosine 5'-phosphate (PAP), an inhibitor of exoribonucleases in the regulation of CTRD. Using 5'Pseq approach, we discovered that FRY1 inactivation impaired XRN4-CTRD activity. Based on this finding, we demonstrated that exogenous PAP treatment stabilizes CTRD mRNA targets. Furthermore, we also tested the implication of the exoribonuclease DXO1 in CTRD regulation. We found that DXO1, another exoribonuclease sensitive to PAP, is also involved in the CTRD pathway, probably by targeting NAD

conclusionsOur study provides further insights into the regulation of CTRD in Arabidopsis and demonstrates that other exoribonucleases can be implicated in this pathway.

Indexed as

Adenosine MonophosphateArabidopsisArabidopsis ProteinsExoribonucleasesRNA StabilityAdenosine DiphosphateGene Expression Regulation, PlantProtein BiosynthesisRNA, Messengeradenosine 3'-phosphate-5'-phosphateAdenosine DiphosphateAdenosine MonophosphateArabidopsis ProteinsExoribonucleasesRNA, Messenger3ʹ-phosphoadenosine 5ʹ-phosphateArabidopsisCo-translational mRNA decayDXO1FRY1XRN4

Identifiers

PMID39966730
PMCPMC11834196

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.