Evidence map›Paper›PMID 39966706›Full record

ArticleBMC plant biology2025

Genome-wide analysis of HSP70 gene family in Beta vulgaris and in-silico expression under environmental stress.

Pravej Alam, Thamir Al Balawi, Muhammad Amir Manzoor, Irfan Ali Sabir

Abstract read
In one paragraph

Article in BMC plant biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Advances in Beet (Plants (Basel, Switzerland) · 2025
    Review
  5. Article
  6. Positive Role ofAntioxidants (Basel, Switzerland) · 2025
    Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Pravej AlamDepartment of Biology, College of Science and Humanities, Prince Sattam bin Abdulaziz University, Alkharj, 11942, Saudi Arabia. alamprez@gmail.com.
Thamir Al BalawiDepartment of Biology, College of Science and Humanities, Prince Sattam bin Abdulaziz University, Alkharj, 11942, Saudi Arabia.
Muhammad Amir ManzoorDepartment of Plant Science, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.
Irfan Ali SabirGuangdong Provincial Key Laboratory of Postharvest Science of Fruits and Vegetables/Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (South China), Ministry of Agriculture and Rural Affairs, College of Horticulture, South China Agricultural University, Guangzhou, 510642, China.

Funding

Prince Sattam bin Abdulaziz University PSAU/2024/01/29170
6 · The paper itself

Abstract

Heat shock proteins, HSP70, are vital for plant stress response mechanisms, particularly under abiotic stresses, such as salinity and drought. However, its role in Beta vulgaris is still unknown. We conducted a comprehensive genome-wide analysis of the BvHSP70 gene family in B. vulgaris roots to elucidate their diverse functions, regulatory mechanisms, and roles in abiotic stress adaptation. We identified 22 BvHSP70 genes, characterized by conserved motifs and cis elements associated with stress response in the gene promoters. miRNA interactions suggest regulatory roles, while gene duplication and syntenic analysis were utilized to reveal evolutionary trends with insights into gene expansion and conservation across species. These findings indicate the involvement of BvHSP70 genes in stress adaptation and broader biological processes. Key regulatory miRNAs were identified in two BvHSP70 genes. Expression analysis under salt stress indicated significant upregulation of BvHSP70-2 gene, BvHSP70-15 gene, and BvHSP70-17 gene after 1 day, whereas BvHSP70-18 showed notable upregulation after 7 days. Under drought stress, BvHSP70-4, BvHSP70-13, and BvHSP70-14 were significantly downregulated, whereas BvHSP70-17 and BvHSP70-20 were significantly upregulated. These findings demonstrate the critical function of the BvHSP70 family in B. vulgaris stress adaptation. Understanding the functional and regulatory mechanisms of BvHSP70 can facilitate the development of strategies to enhance stress tolerance in B. vulgaris and other crops, thereby contributing to agricultural sustainability and food security.

Indexed as

AcclimatizationBeta vulgarisHSP70 Heat-Shock ProteinsPlant ProteinsComputer SimulationGene Expression Regulation, PlantGenome-Wide Association StudyHeat-Shock ResponsePhylogenyRNA, MitochondrialStress, PhysiologicalHSP70 Heat-Shock ProteinsPlant ProteinsRNA, MitochondrialAbiotic stressBvHSP70 familyGene expressionGenome-wideSalt tolerance

Identifiers

PMID39966706
PMCPMC11834558

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.