Evidence map›Paper›PMID 39966525›Full record

ArticleScientific reports2025

Expression profile and characterization of respiratory burst oxidase homolog genes in rice under MeJA, SA and Xoo treatments.

Shahneela Khaskhali, Xiaorong Xiao, Zihe Zhang, Farheen Solangi, Sajjad Hussain, Yinhua Chen

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Shahneela KhaskhaliNational Key laboratory for Tropical Crop Breeding, Sanya Institute of Breeding and Multiplication, Hainan University, Sanya, 572024, China.
Xiaorong XiaoCereal Crops Institute, Hainan Academy of Agricultural Sciences/Key Laboratory of Crop Genetics and Breeding of Hainan Province, Haikou, 571100, China.
Zihe ZhangNational Key laboratory for Tropical Crop Breeding, Sanya Institute of Breeding and Multiplication, Hainan University, Sanya, 572024, China.
Farheen SolangiResearch Centre of Fluid Machinery Engineering and Technology, Jiangsu University, Zhenjiang, 212013, China.
Sajjad HussainEnvironmental Engineering Department, NED University of Engineering and Technology, Karachi, Sindh, Pakistan.
Yinhua ChenNational Key laboratory for Tropical Crop Breeding, Sanya Institute of Breeding and Multiplication, Hainan University, Sanya, 572024, China. yhchen@hainanu.edu.cn.

Funding

China National Seed Group B23CQ15CPProject of Hainan Yazhou Bay Seed Laboratory B23YQ1512
6 · The paper itself

Abstract

Respiratory burst oxidase homologs (Rboh) genes is essential for synthesizing reactive oxygen species, which play a crucial role in environmental stress response. The Rboh gene family has been studied in model plants such as Arabidopsis. Nevertheless, Rboh remained largely unexplored in Rice (Oryza sativa L.). Here, we performed characterization of the Rboh genes family in rice (OsRboh) under Xanthomonas oryzae pv. oryzae (Xoo), salicylic acid (SA), and methyl jasmonate (MeJA) treatments. Nine OsRboh genes were retrieved distributed across six chromosomes (1, 5, 8, 9, 11, 12).These genes vary in amino acid sequence length (728-1034), isoelectric point (9.05-9.84), and molecular weight (8.341-115.014 kDa). Analysis of gene structure, motifs and conserved domains showed that OsRboh genes have similar protein sequences and functions. The promoter region of OsRboh genes was found to contain mainly cis-acting elements associated with light, jasmonic acid (JA), abscisic acid (ABA), and SA responsiveness. Predictions of functional protein-protein interaction showed that OsRboh genes were associated with MAPK signaling, plant-pathogen interaction, and other mRNA surveillance pathways. Prediction of miRNA targets and post-translational modification sites indicated that OsRboh genes may be regulated by miRNA and protein phosphorylation. Phylogenetic analysis showed that OsRboh genes were distributed into 7 clusters. Furthermore, 9 OsRboh genes were differentially expressed in different tissues (roots, stems, and leaves). OsRbohA, OsRbohB, and OsRbohD are significant genes in rice defense responses, showing unique and increased expression profiles under (Xoo-PXO99), (MeJA), and (SA) treatments. These genes important function in triggering defense mechanisms is further stressed by the high (> 20-fold) changes in expression they exhibit under these treatments. These findings enhance our understanding of rice OsRboh genes functions and contribute to stress tolerance improvement strategies.

Indexed as

AcetatesCyclopentanesNADPH OxidasesOryzaOxylipinsPlant ProteinsSalicylic AcidXanthomonasGene Expression ProfilingGene Expression Regulation, PlantPhylogenyPlant DiseasesPromoter Regions, GeneticAcetatesCyclopentanesmethyl jasmonateNADPH OxidasesOxylipinsPlant ProteinsSalicylic Acidsuperoxide-forming enzymeMethyl jasmonateRespiratory burst oxidase homologsRiceSalicylic acidXanthomonas oryzae pv. oryzae

Identifiers

PMID39966525
PMCPMC11836059

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