Evidence map›Paper›PMID 39966457›Full record

ArticleScientific reports2025

Model-based iterative reconstruction with adaptive regularization for artifact reduction in electron tomography.

Singanallur Venkatakrishnan, Obaidullah Rahman, Lynda Amichi, Jose D Arregui-Mena, Haoran Yu, David A Cullen, Amirkoushyar Ziabari

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Singanallur VenkatakrishnanMulti-modal Sensor Analytics Group, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA. venkatakrisv@ornl.gov.
Obaidullah RahmanMulti-modal Sensor Analytics Group, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA.
Lynda AmichiElectron Microscopy and Microanalysis Group, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA.
Jose D Arregui-MenaNuclear Energy Materials Microanalysis Group, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA.
Haoran YuElectron Microscopy and Microanalysis Group, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA.
David A CullenElectron Microscopy and Microanalysis Group, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA.
Amirkoushyar ZiabariMulti-modal Sensor Analytics Group, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA. ziabariak@ornl.gov.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Obtaining high-quality 3D reconstructions from electron tomography of crystalline particles embedded in lighter support elements is crucial for various material systems such as catalysts for fuel cell applications. However, significant challenges arise due to the limited tilt range, sparse and low signal-to-noise ratio of the measurements. In addition, small metal particles can cause strong streaking and shading artifacts in the 3D reconstructions when using conventional reconstruction algorithms due to the presence of Bragg diffraction and the large scattering cross-section difference between the materials of the particles and the background support regions. These artifacts lead to errors in the downstream characterization affecting extraction of critical features such as the size of the metal particles, their distribution and the volume of the lighter support regions. In this paper, we present a two-stage algorithm based on metal artifact reduction, utilizing model-based iterative reconstruction methods with adaptive adjustment of regularization parameters. Our approach yields high-quality 3D reconstructions compared to traditional algorithms, accurately capturing both the metal particles as well as the background support. We demonstrate the effectiveness of our algorithm through simulated and experimental bright-field electron tomography data, showing significant improvements in reconstruction quality compared to traditional methods.

Indexed as

Artifact reductionDiffractionElectron tomographyModel-based reconstruction

Identifiers

PMID39966457
PMCPMC11836456

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.