ArticleJournal of cheminformatics2025
Predictive modeling of biodegradation pathways using transformer architectures.
Article in Journal of cheminformatics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
2 citing papers in PubMed.
- Predicting enzyme-compound associations for enzyme-catalysed reactions.Journal of cheminformatics · 2026Article
- Environmental fate, biodegradation pathways, and phytotoxicological risks of biopolymer-based packaging: a critical review.Environmental science and pollution research international · 2026Review
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
5 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
In recent years, the integration of machine learning techniques into chemical reaction product prediction has opened new avenues for understanding and predicting the behaviour of chemical substances. The necessity for such predictive methods stems from the growing regulatory and social awareness of the environmental consequences associated with the persistence and accumulation of chemical residues. Traditional biodegradation prediction methods rely on expert knowledge to perform predictions. However, creating this expert knowledge is becoming increasingly prohibitive due to the complexity and diversity of newer datasets, leaving existing methods unable to perform predictions on these datasets. We formulate the product prediction problem as a sequence-to-sequence generation task and take inspiration from natural language processing and other reaction prediction tasks. In doing so, we reduce the need for the expensive manual creation of expert-based rules.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.