Evidence map›Paper›PMID 39961940›Full record

ArticleJournal of neuro-oncology2025

T-type calcium channels regulate medulloblastoma and can be targeted for therapy.

Collin J Dube, Michelle Lai, Ying Zhang, Shekhar Saha, Ulas Yener, Farina Hanif, Kadie Hudson, Myron K Gibert, Pawel Marcinkiewicz, Yunan Sun and 13 more

Abstract read
In one paragraph

Article in Journal of neuro-oncology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

Collin J DubeDepartment of Microbiology, Immunology & Cancer Biology, University of Virginia, Charlottesville, VA, 22908, USA.
Michelle LaiDepartment of Microbiology, Immunology & Cancer Biology, University of Virginia, Charlottesville, VA, 22908, USA.
Ying ZhangDepartment of Microbiology, Immunology & Cancer Biology, University of Virginia, Charlottesville, VA, 22908, USA.
Shekhar SahaDepartment of Microbiology, Immunology & Cancer Biology, University of Virginia, Charlottesville, VA, 22908, USA.
Ulas YenerDepartment of Neurosurgery, Stanford University School of Medicine, Stanford, CA, USA.
Farina HanifDepartment of Microbiology, Immunology & Cancer Biology, University of Virginia, Charlottesville, VA, 22908, USA.
Kadie HudsonDepartment of Microbiology, Immunology & Cancer Biology, University of Virginia, Charlottesville, VA, 22908, USA.
Myron K GibertDepartment of Microbiology, Immunology & Cancer Biology, University of Virginia, Charlottesville, VA, 22908, USA.
Pawel MarcinkiewiczDepartment of Microbiology, Immunology & Cancer Biology, University of Virginia, Charlottesville, VA, 22908, USA.
Yunan SunDepartment of Microbiology, Immunology & Cancer Biology, University of Virginia, Charlottesville, VA, 22908, USA.
Tanvika VegirajuDepartment of Microbiology, Immunology & Cancer Biology, University of Virginia, Charlottesville, VA, 22908, USA.
Esther XuDepartment of Microbiology, Immunology & Cancer Biology, University of Virginia, Charlottesville, VA, 22908, USA.
Aditya SorotDepartment of Microbiology, Immunology & Cancer Biology, University of Virginia, Charlottesville, VA, 22908, USA.
Rosa I GallagherGeorge Mason University Center for Applied Proteomics and Molecular Medicine, Manassas, VA, 20155, USA.
Julia D WulfkuhleGeorge Mason University Center for Applied Proteomics and Molecular Medicine, Manassas, VA, 20155, USA.
Ashley VernonDepartment of Microbiology, Immunology & Cancer Biology, University of Virginia, Charlottesville, VA, 22908, USA.
Lily Dell'OlioDepartment of Microbiology, Immunology & Cancer Biology, University of Virginia, Charlottesville, VA, 22908, USA.
Rajitha AnbuDepartment of Microbiology, Immunology & Cancer Biology, University of Virginia, Charlottesville, VA, 22908, USA.
Elizabeth MulcahyDepartment of Microbiology, Immunology & Cancer Biology, University of Virginia, Charlottesville, VA, 22908, USA.
Benjamin KefasDepartment of Pharmacy, University of Virginia, Charlottesville, VA, 22908, USA.
Fadila GuessousLaboratory of Onco-Pathology, Biology and Cancer Environment, Faculty of Medicine, University of Sciences and Health, Mohammed, Casablanca, VI, Morocco.
Emanuel F PetricoinGeorge Mason University Center for Applied Proteomics and Molecular Medicine, Manassas, VA, 20155, USA.
Roger AbounaderDepartment of Microbiology, Immunology & Cancer Biology, University of Virginia, Charlottesville, VA, 22908, USA. ra6u@virginia.edu.

Funding

Cancer Research Training Program: From Molecular Mechanisms to Therapeutic StrategiesT32CA009109 · NCI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI Andrew Carl Dudley, Melanie R Rutkowski · 1985 to 2026
$13.9M
Master Regulatory MicroRNAs in GlioblastomaU01CA220841 · NCI · UNIVERSITY OF VIRGINIA · PI ABOUNADER, ROGER · 2017 to 2021
$2.5M
Calcium Channels in GlioblastomaR01NS122222 · NINDS · UNIVERSITY OF VIRGINIA · PI Roger Abounader · 2022 to 2026
$2.5M
Transcribed Ultra Conserved Regions in GlioblastomaR21NS122136 · NINDS · UNIVERSITY OF VIRGINIA · PI ABOUNADER, ROGER · 2021 to 2022
$444k
NCI NIH HHS 5T32CA009109-47NCI NIH HHS CA220841NCI NIH HHS T32 CA009109NCI NIH HHS U01 CA220841NINDS NIH HHS NS122222NINDS NIH HHS R01 NS122222NINDS NIH HHS R21 NS122136
6 · The paper itself

Abstract

purposeThe goal of this study was to investigate the role and therapeutic targeting of T-type calcium channels in medulloblastoma, a common and deadly pediatric brain tumor that arises in the cerebellum.

methodsT-type calcium channel expression was assessed in publicly available bulk and single cell RNA-seq datasets. The effects of T-type calcium channel blocker mibefradil on cell growth, death and invasion were assessed with cell counting, alamar blue, trypan blue and transwell assays. Proteomic-based drug target and signaling pathway mapping was performed with Reverse Phase Protein Arrays (RPPA). Co-expression modules of single cell RNA-seq data were generated using high dimensional weighted gene co-expression network analysis (hdWGCNA). Orthotopic xenografts were used for therapeutic studies with the T-Type calcium channel blocker mibefradil.

resultsT-type calcium channels were upregulated in more than 30% of medulloblastoma tumors and patients with high expression associated with a worse prognosis. T-type calcium channels had variable expression across all the subgroups of medulloblastoma at the bulk RNA-seq and single-cell RNA-seq level. Mibefradil treatment or siRNA mediated silencing of T-type calcium channels inhibited tumor cell growth, viability and invasion. RPPA-based protein/phosphoprotein signal pathway activation mapping of T-type calcium channel inhibition and single cell hdWGCNA identified altered cancer signaling pathways. Oral administration of mibefradil inhibited medulloblastoma xenograft growth and prolonged animal survival.

conclusionOur results represent a first comprehensive multi-omic characterization of T-type calcium channels in medulloblastoma and provide preclinical data for repurposing mibefradil as a treatment strategy for these relatively common pediatric brain tumors.

Indexed as

Calcium Channel BlockersCalcium Channels, T-TypeCerebellar NeoplasmsMedulloblastomaMibefradilAnimalsCell ProliferationGene Expression Regulation, NeoplasticHumansMiceXenograft Model Antitumor AssaysCalcium Channel BlockersCalcium Channels, T-TypeMibefradilMedulloblastomaMibefradilT-type calcium channels

Identifiers

PMID39961940
PMCPMC12041153

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.