Evidence map›Paper›PMID 39960563›Full record

ArticleJournal of molecular neuroscience : MN2025

Identification of Key Genes and Immune Characteristics of SASP in Acute Ischemic Stroke.

Hanlu Cai, Huixue Zhang, Guanghao Xin, Shanshan Peng, Fanfan Xu, Nan Zhang, Yichen Li, Wei Zhang, Ying Li, Yingjie Ren and 4 more

Abstract read
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In one paragraph

Article in Journal of molecular neuroscience : MN, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Hanlu Cai *The Second Affiliated Hospital, Harbin Medical University, Heilongjiang Province, Harbin, 150086, China.
Huixue Zhang *The Second Affiliated Hospital, Harbin Medical University, Heilongjiang Province, Harbin, 150086, China.
Guanghao XinThe Second Affiliated Hospital, Harbin Medical University, Heilongjiang Province, Harbin, 150086, China.
Shanshan PengThe Second Affiliated Hospital, Harbin Medical University, Heilongjiang Province, Harbin, 150086, China.
Fanfan XuThe Second Affiliated Hospital, Harbin Medical University, Heilongjiang Province, Harbin, 150086, China.
Nan ZhangThe Second Affiliated Hospital, Harbin Medical University, Heilongjiang Province, Harbin, 150086, China.
Yichen LiThe Second Affiliated Hospital, Harbin Medical University, Heilongjiang Province, Harbin, 150086, China.
Wei ZhangThe Second Affiliated Hospital, Harbin Medical University, Heilongjiang Province, Harbin, 150086, China.
Ying LiThe Second Affiliated Hospital, Harbin Medical University, Heilongjiang Province, Harbin, 150086, China.
Yingjie RenThe Second Affiliated Hospital, Harbin Medical University, Heilongjiang Province, Harbin, 150086, China.
Yu WangThe Second Affiliated Hospital, Harbin Medical University, Heilongjiang Province, Harbin, 150086, China.
Zhaojun LiuThe Second Affiliated Hospital, Harbin Medical University, Heilongjiang Province, Harbin, 150086, China.
Xiaotong KongThe Second Affiliated Hospital, Harbin Medical University, Heilongjiang Province, Harbin, 150086, China. kxt199025@126.com.
Lihua WangThe Second Affiliated Hospital, Harbin Medical University, Heilongjiang Province, Harbin, 150086, China. wanglh211@163.com.

Funding

Heilongjiang Province Natural Science Foundation Program-Outstanding Young YQ2023H011National Natural Science Foundation of China 82171396National Natural Science Foundation of China 82271434
6 · The paper itself

Abstract

The senescence-associated secretory phenotype (SASP) is a key mechanism through which senescent cardiovascular cells contribute to plaque formation, instability, and vascular remodeling. However, the correlation between SASP and acute ischemic stroke (AIS), particularly its immune inflammation characteristics, remains underexplored and requires further elucidation. We downloaded the AIS database from the GEO database and obtained SASP genes from the SASP Atlas and related literature. Using two machine learning algorithms, we identified five hub genes. Unsupervised cluster analysis was performed on patients with AIS and DEGs separately to identify distinct gene clusters, which were then analyzed for immune characteristics. We then explored the related biological functions and immune properties of the hub genes by using various algorithms (GSEA, GSVA, and CIBERSORT). Principal component analysis (PCA) was used to generate SASP-related gene scores based on the expression of hub genes. A logistic regression algorithm was employed to establish an AIS classification diagnosis model based on the hub genes. Peripheral venous blood was collected for validation using real-time quantitative PCR (RT-qPCR). We identified five hub genes using two machine learning algorithms and validated them with RT-qPCR. Gene cluster analysis revealed two distinct clusters, SASP-related gene cluster B and differentially expressed gene cluster B, indicating that the acute AIS samples had more severe immune inflammatory response and a higher risk of disease deterioration. We constructed a gene-drug regulatory network for PIN1 and established an AIS diagnostic model and nomogram using a logistic regression algorithm. This study explored the gene expression, molecular patterns, and immunological characteristics of SASP in patients with AIS using bioinformatic methods. It provides a theoretical basis and research direction for identifying new diagnostic markers for AIS, understanding the molecular mechanism of thrombosis, and improving the classification, diagnosis, treatment, and prognosis of AIS.

Indexed as

Ischemic StrokeGene Regulatory NetworksHumansMachine LearningAcute ischemic strokeDiagnostic modelImmune inflammation characteristicsMachine learningSenescence-associated secretory phenotype

Identifiers

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.