Evidence map›Paper›PMID 39960436›Full record

ArticleChemistry (Weinheim an der Bergstrasse, Germany)2025

Identification of Two Distinct Stereoselective Lysine 5-Hydroxylases by Genome Mining Based on Alazopeptin Biosynthetic Enzymes.

Seiji Kawai, Kota Moriga, Warawadee Nirdnoy, Ryotaro Hara, Jun Ogawa, Yohei Katsuyama, Yasuo Ohnishi

Abstract read
In one paragraph

Article in Chemistry (Weinheim an der Bergstrasse, Germany), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Seiji KawaiDepartment of Biotechnology, Graduate School of Agricultural and Life Sciences, The, University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo, 113-8657, Japan.ORCID https://orcid.org/0000-0003-3989-2547
Kota MorigaDepartment of Biotechnology, Graduate School of Agricultural and Life Sciences, The, University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo, 113-8657, Japan.ORCID https://orcid.org/0009-0001-2849-9056
Warawadee NirdnoyDivision of Applied Life Sciences, Graduate School of Agriculture, Kyoto University, Kitashirakawa-oiwakecho, Sakyo-ku, Kyoto, 606-8502, Japan.
Ryotaro HaraDivision of Applied Life Sciences, Graduate School of Agriculture, Kyoto University, Kitashirakawa-oiwakecho, Sakyo-ku, Kyoto, 606-8502, Japan.ORCID https://orcid.org/0000-0003-0553-3837
Jun OgawaDivision of Applied Life Sciences, Graduate School of Agriculture, Kyoto University, Kitashirakawa-oiwakecho, Sakyo-ku, Kyoto, 606-8502, Japan.ORCID https://orcid.org/0000-0003-2741-621X
Yohei KatsuyamaDepartment of Biotechnology, Graduate School of Agricultural and Life Sciences, The, University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo, 113-8657, Japan.ORCID https://orcid.org/0000-0003-4905-5320
Yasuo OhnishiDepartment of Biotechnology, Graduate School of Agricultural and Life Sciences, The, University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo, 113-8657, Japan.ORCID https://orcid.org/0000-0001-7633-9236

Funding

Japan Society for the Promotion of Science 19H04645Japan Society for the Promotion of Science 19H05685Japan Society for the Promotion of Science 22H05130Japan Society for the Promotion of Science 22KJ1046New Energy and Industrial Technology Development Organization
6 · The paper itself

Abstract

Enzymes that catalyze regioselective and stereoselective hydroxylation of amino acids are useful tools for the synthesis of pharmaceuticals. AzpK is an unprecedented lysine 5-hydroxylase that is involved in alazopeptin biosynthesis, although its enzymatic activity has not been confirmed in vitro. Here, we identified two α-ketoglutarate/Fe

Indexed as

LysineMixed Function OxygenasesActinobacteriaHydroxylationHydroxylysineKetoglutaric AcidsMultigene FamilyPseudomonasStereoisomerismSubstrate SpecificityHydroxylysineKetoglutaric AcidsLysineMixed Function Oxygenases5-HydroxylysineAlazopeptinDehydrogenationEnzymesHydroxylation

Identifiers

PMID39960436
PMCPMC11973848

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.